XLOC_010217 (FP016247.1)



Basic Information


Item Value
gene id XLOC_010217
gene name FP016247.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 45217307 ~ 45273719 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00020221
ttcatccacCTAGCCACCTCTACAACCTGACAACCCATTGCATCATGACACCTTCTATCATCTTTCAGCCAGAATACCTTGAGACCTCCTAGCCACCCCATGGCAACcttcttaaaataatttattctggGCTACCTCGTCAATCTGTTAACCCATTGCATCAAGACGGTGATGTTGGCGATGAGCTGGTTGACACTGGATGAGCAAACATATTTCCACCTCCACTGTGTGGAGTCAAACACTCTCAGCCTCTGGTCTGCTGCACTCACCTGCACTGCAGGACACAATCAAGACTGTACGTGactgaaacacaaacaaacaagtgtAATAAGTCTCAAAAGTGACAGCAGTATTCTGCTAAATCAGCAGATATAACAAGCAAACCGGTCTCACCGAGGGCCCAGATGGCGGCTCCCAGCCCTCCCAGAATAATCAAGATCAGAGAAACTGCAGCGACCACCCGGCATGGACTGAAGATGCTCATGCCTGGACGTCCTGAAGGACATAAACCAAACAGGGCTTTCAGTATGGGGACAAAG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099497

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00020221 True 539 lncRNA 0.48 4 45217307 45273719

Neighbor


gene id symbol gene type direction distance location
XLOC_010216 FP085399.1 coding upstream 11071 45203090 ~ 45206236 (+)
XLOC_010215 cd22 coding upstream 299559 44906324 ~ 44917748 (+)
XLOC_010214 upk1a coding upstream 436563 44768361 ~ 44780744 (+)
XLOC_010213 CR925804.1 coding upstream 512153 44704372 ~ 44705154 (+)
XLOC_010212 zgc:101716 coding upstream 529338 44678302 ~ 44687969 (+)
XLOC_010218 dnase2 coding downstream 63944 45337663 ~ 45357518 (+)
XLOC_010219 phf1 coding downstream 151188 45424907 ~ 45443805 (+)
XLOC_010220 NA coding downstream 182261 45455980 ~ 45691220 (+)
XLOC_010221 CU062666.1 coding downstream 314495 45588214 ~ 45588330 (+)
XLOC_010222 CU459129.1 coding downstream 393016 45666735 ~ 45666852 (+)
XLOC_010211 CR925804.2 non-coding upstream 611867 44605326 ~ 44605440 (+)
XLOC_010209 NA non-coding upstream 1398742 43765979 ~ 43818565 (+)
XLOC_010208 NA non-coding upstream 1529739 43687153 ~ 43687568 (+)
XLOC_010225 NA non-coding downstream 513323 45787042 ~ 45812324 (+)
XLOC_010228 NA non-coding downstream 714712 45988431 ~ 45990842 (+)

Expression



Co-expression Network