Gene
RNA
| Item | Value |
|---|---|
| gene id | G256883 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000059 |
| NCBI id | null |
| chromosome length | 10376574 |
| location | 8963296 ~ 9012747 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU291566 | False | 401 | lncRNA | 0.44 | 2 | 8963296 | 9012747 |
| TU291565 | True | 558 | lncRNA | 0.45 | 2 | 9012127 | 9012747 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000059_08541617_08550032 | LHX3 | coding | downstream | 413264 | 8541161 ~ 8550032 (-) |
| CI01000059_08483765_08492276 | NA | coding | downstream | 470478 | 8483445 ~ 8492818 (-) |
| CI01000059_08434015_08446002 | NACC2 | coding | downstream | 517294 | 8433695 ~ 8446002 (-) |
| CI01000059_08382830_08423907 | NA | coding | downstream | 538572 | 8382372 ~ 8424724 (-) |
| CI01000059_08360308_08360726 | NA | coding | downstream | 602489 | 8359765 ~ 8360807 (-) |
| CI01000059_09346204_09347082 | NA | coding | upstream | 333441 | 9346188 ~ 9348023 (-) |
| CI01000059_09706218_09708197 | TRIM32 | coding | upstream | 692523 | 9705270 ~ 9709619 (-) |
| CI01000059_09783667_09789126 | NA | coding | upstream | 770882 | 9783629 ~ 9789298 (-) |
| CI01000059_09797419_09887264 | PAPPAA, PAPPA | coding | upstream | 784633 | 9797380 ~ 9887264 (-) |
| CI01000059_09908635_09925766 | ZNF618 | coding | upstream | 895140 | 9907887 ~ 9925766 (-) |
| G256876 | NA | non-coding | downstream | 16143 | 8944513 ~ 8947153 (-) |
| G256840 | NA | non-coding | downstream | 92413 | 8870621 ~ 8870883 (-) |
| G256807 | NA | non-coding | downstream | 130636 | 8808655 ~ 8832660 (-) |
| G256781 | NA | non-coding | downstream | 238835 | 8724244 ~ 8724461 (-) |
| G256779 | NA | non-coding | downstream | 244493 | 8718551 ~ 8718803 (-) |
| G256929 | NA | non-coding | upstream | 38670 | 9051417 ~ 9051634 (-) |
| G256947 | NA | non-coding | upstream | 103231 | 9115978 ~ 9116179 (-) |
| G256951 | NA | non-coding | upstream | 114033 | 9126780 ~ 9280018 (-) |
| G257020 | NA | non-coding | upstream | 355060 | 9367807 ~ 9369543 (-) |
| G257031 | NA | non-coding | upstream | 371926 | 9384673 ~ 9415201 (-) |
| G255092 | NA | other | downstream | 2720504 | 6236106 ~ 6242792 (-) |
| G254203 | NA | other | downstream | 3724997 | 5237786 ~ 5238299 (-) |
| G253914 | NA | other | downstream | 4209214 | 4753538 ~ 4754082 (-) |
| G253013 | NA | other | downstream | 5491387 | 3471475 ~ 3471909 (-) |
| CI01000059_02096875_02098872 | CDC26 | other | downstream | 6863629 | 2094279 ~ 2098985 (-) |
| G257014 | NA | other | upstream | 441469 | 9454216 ~ 9599008 (-) |
