CI01000062_00459377_00459927


Basic Information

Item Value
gene id CI01000062_00459377_00459927
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 459177 ~ 460140 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_00459377_00459927.mRNA
AGATGCATTATATCAATGAGAATGAGATTGAAAATGTGCTTAACTGCCATGGAAATAAATGTTGCAATGCATTTAACGGCCATAAAACTTCACTTACTGTACCTGCACAATTTATGCTTTTCTTTTGATTTTAGGGTAAAATATGACCTGGGCACATTTTCTTGAGATTCATCCTTATAGGAACATTGACAGTGAGCTCACAAAGCTTTCGAAATGGCTTCTTTGTGTCAAATCATGCATTACAGACAAACGGTAATAAAGATCCAGAGAGGGAGTATGTGTATTAAAGCAGCCATAGTTGCCAGTCTCAACTTTCACGCTGCAAAACAAGGAAAGAGCGGTCCTGAGGGTCATCTGCTCTGGTCTGAAAGAGAGGTCTGGAATGATAAAGGGGAAACCAAAACATGTCTAATAGTAGAGCTTCTGTTTCAATGTGTCCCCATCGCTGACCTCTCCACTGGACACCTGCCGGAAGCTCTCAGCAGGAAATACATTGTCCAGCTCATAAGGACTCCATAACATCTCGACCCCTGCAGCACGATCCATAACAGAAAATGCTTCGCATCTGTTATGCGTCATATTTTCAAGAGTTTTCTTGTGTATAACGAGCTGCGAGAATCACTTTCTTGCCCGAGGGCAGTGATTTCATGTTCAGTTCCATCTTTTTATTGCACATCATCAAGGACGTACTTTCATTTTCCCGTACTGGAGGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_00459377_00459927.mRNA True 719 mRNA 0.41 3 459177 460140

Neighbor

gene id symbol gene type direction distance location
CI01000062_00215004_00216872 NA coding downstream 242305 214502 ~ 216872 (-)
CI01000062_00205449_00208640 NA coding downstream 250537 205449 ~ 208640 (-)
CI01000062_00000216_00015634 EPRS coding downstream 443543 216 ~ 15712 (-)
CI01000062_00491892_00492929 NA coding upstream 31709 491849 ~ 493776 (-)
CI01000062_00501459_00565291 CCDC88C coding upstream 41319 501459 ~ 565291 (-)
CI01000062_00576651_00595216 SPTB coding upstream 116272 576412 ~ 595867 (-)
CI01000062_00596852_00598234 NA coding upstream 136165 596305 ~ 598234 (-)
CI01000062_00606761_00645828 STARD9 coding upstream 145035 605175 ~ 645828 (-)
G258703 NA non-coding downstream 50031 408915 ~ 409146 (-)
G258603 NA non-coding downstream 199009 259855 ~ 260168 (-)
G258549 NA non-coding downstream 221445 237500 ~ 237732 (-)
G259368 NA non-coding upstream 229573 689713 ~ 728536 (-)
G259414 NA non-coding upstream 268484 728624 ~ 728858 (-)
G259416 NA non-coding upstream 283955 744095 ~ 744301 (-)
G259417 NA non-coding upstream 287724 747864 ~ 748114 (-)
G259419 NA non-coding upstream 301618 761758 ~ 761961 (-)
G261400 NA other upstream 3485295 3945435 ~ 3957385 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011620 NA non-coding NC_007128.7 CM002901.2 38783161 ~ 38784521 (+)