CI01000062_00953238_00953543


Basic Information

Item Value
gene id CI01000062_00953238_00953543
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 952511 ~ 954015 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_00953238_00953543.mRNA
ACATTAGATGTCTGCCGCTACAATCAGAGCTGAATTAGCCCTAATATTTATTTCCAGAAACAATTGTACATTCCTCAGCAGGGCAATGATTGGACATGTTGTGGACAGATGTTTAGATGAGCTCATGTTTTAATGTTGATTTTGGAGGGTTCTTCTCCAAATCGCCTTTTTATACACCCACTTCTGTGTCGACTTTTGTCTTTTTATCACTGGACACAGAAAGCGATTCTATGAACAATCAGAGTTTTACTGATATTTATGTAATTATGCAATCATCAGATAAGAAAACTTGACTAGTGCGCTTCTCGATGTGTAGAAAACCGTTCTCAAAATGGGGCAAAAACGCAATTAAACCATAATAAACATTACAAAAACAAACAAGAGGAGATTTATTGACTGCTACGACTAATTAGCTCTGGAGGAAATGTGCAGGATCATAATGTCACAAGAAATCAGTTGACTGCAACCAGGCATGAAGTATAATGGTAACATATGCAGCAAGGAGCTTAAGACTCTCCAAACAGATCATATACCTCCCACAGGTACCTGCAGTAGATTGGAGCAGCTCTTAAAAAGAGCAAACACCTCAAATGTGCGCAAATATGCGTTTGTTTACACCACGAATGGATTACTTTCTTCTGGTGATCATAAAACATCACTCCCTCTGAGTCTGACCCATACGCCTGCCTGCAAGAACTACTGTCGAACTACTGTTTGCATGAGCCGGATGTGGATTGTCGCTGTTGTGTCAGCTGTTTATCAGCGAGCCGAGCCTTGAACGGATGGAGTTTAGTCTGCCGGGGTAATGTACGAGCCAGCCAGGGGCCGCCGACGTTATCTTAATGGTATGATTTATGGAGGTCGCGCGCTGAACTGAGCAGAGGAGCCGCGACAGATGGGGACGTGCGTGGGAGACGTTACTGTAGACGGTTCGCGCGCGGGCGCGCACACACACACAACCACACATACGCTCATCCATCATGTATTTTGTGTTGCTGTAAGCAATGAGGATAATTGCGGTGTTATGGTAAGAGTAGCGTGATTATGATTGTTCGACATGGGAGGCTGTGTCTGGGCTAGCGCTCGCGCTCATTTTCCCGGGCAAATTATTAAAATGAGGCCTTTGGAGCGAACTGAAAAGACTGAAAGGAGTTGGCTGGCTACAGCAAATACAATATATTCAATCGCCTGATAACGATGGTGATCTAATCAGTGATGTTAATGTTAACCACATTCATTTTTGATAAAACATACTCTCTGTGTTTGAATGACGTTTGTGCCGTTGGCGAAAATTCACGTCAAGCTAAATTGGCTCATTTATGAATTTTTCTATTAAGAAATCTTGGCATATCTAACGTGAGTGTGTAAACGCGGCTTTTAAAGTCAGTTTAATTGTCCCTGGTAAAGAAAAATGTTTTCGTATTCTTTCATTAAATGGTAACGACTTCTGGCTCCGAAACGACTTTCCTTTTTGGTGACGTCACATAGGAAATTTAGTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_00953238_00953543.mRNA True 1505 mRNA 0.42 1 952511 954015

Neighbor

gene id symbol gene type direction distance location
CI01000062_00877361_00878217 NA coding downstream 73836 875653 ~ 878675 (-)
CI01000062_00842607_00851041 SLC25A21 coding downstream 101470 842416 ~ 851041 (-)
CI01000062_00808148_00808981 NKX2.9 coding downstream 143409 807733 ~ 809102 (-)
CI01000062_00799628_00801034 NKX2.1, NKX2-1 coding downstream 150011 799045 ~ 802500 (-)
CI01000062_00770718_00777617 NA coding downstream 174687 770590 ~ 777824 (-)
CI01000062_00963254_00999381 PLEKHH1 coding upstream 9191 963206 ~ 999381 (-)
CI01000062_01131089_01166027 NA coding upstream 176850 1130865 ~ 1166607 (-)
CI01000062_01191296_01194695 TMEM229B coding upstream 236678 1190693 ~ 1194695 (-)
CI01000062_01210373_01227487 MTA1 coding upstream 256045 1210060 ~ 1227487 (-)
CI01000062_01361295_01382538 ELMSAN1B coding upstream 407280 1361295 ~ 1382771 (-)
G259421 NA non-coding downstream 173531 778684 ~ 778980 (-)
G259419 NA non-coding downstream 190550 761758 ~ 761961 (-)
G259417 NA non-coding downstream 204397 747864 ~ 748114 (-)
G259416 NA non-coding downstream 208210 744095 ~ 744301 (-)
G259414 NA non-coding downstream 223653 728624 ~ 728858 (-)
G259465 NA non-coding upstream 65492 1019507 ~ 1105910 (-)
G259516 NA non-coding upstream 378818 1332833 ~ 1340498 (-)
G259597 NA non-coding upstream 535915 1489930 ~ 1499660 (-)
G259598 NA non-coding upstream 551032 1505047 ~ 1510116 (-)
CI01000062_00000216_00015634 EPRS other downstream 936799 216 ~ 15712 (-)
G261400 NA other upstream 2991420 3945435 ~ 3957385 (-)

Expression


Co-expression Network