CI01000062_01401358_01417189 (TMEM62)


Basic Information

Item Value
gene id CI01000062_01401358_01417189
gene name TMEM62
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 1400405 ~ 1417189 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_01401358_01417189.mRNA
ATGCTCAGGCTGTTCGCGGCGCTGATGATTGTTGGGCTGCTGCTCGCGTGCTTCACTTCCTGGCTGTTTGACAGCTATGACACCGCCTGGCACCCGAAGCGCAGTTTACATCAGTCCAAGAAGATCGGTCCACCGTATCCCAGCGGGCAGCTGGACAATATATTTTGGTTTGTGCAGGTGTCCGACATCCATATCAGTCGTTTCCACGATCCAAGGCGCATTCCAGACTTCGAAAGGTTCTGTAGTGACACTATTGATGTGATAAAACCTGATCTTGTGCTGGCCACAGGGGACTTAACAGATGCAAAGACTGAGAGTAAAATTGGCTCTCTTCAACATGAAGTGGAGTGGCAGTCCTACCACAACATCCTTAAAAGATCACGAGTGCTGGAACGCACAAAATGGATTGACATTCGGGGAAACCATGATGCCTTTAATATTATTTCTCTGGAGAGCGTGAACAATTATTACAGGAAGTACTCTGCCAATCAGAAAGTTGGATCCTTCCACTACATACACAGAACCCCGTTTGGGAACTACTCCTTCATTTGTGCCGATGCCACTCTGACCCCTGGACCCAAACGGCCCTATAACTTCTTTGGGATTATCAATCAAACTCAGATGGACATGTTGGCGACCTTTAGAGAGGAGAGCCTGAGCAGTAACAAGTCCATCTGGTTTGGACATTATACCACATCTACTGTCATCTCCCCCTTCCCAGGAATCCGAGAGCTCATGAGTACAGCTGTAGCGTACTTGTGTGGGCACCTACATACACTAGGAGGCTTCATGCCAGTACTGCACAGTCGACATCAAGGAGGCACGCTGGAGTTAGAGCTGGGAGACTGGATGGAGAACCGCAGGTACAGGATATTGGCTTTCGACCATGACCTGCTTAGTTTCTCCGATTTGACGTTTGAGGACTGGCCAGCTGTGCTGATCACCAATCCCAAAGACGCACAGTACCTTCACCCAGGAGTGGAGCCTCTGGGTCGTATCCGCAGTTCCACGCACATCAGGGTCCTGGCTTTTTCTGAGTCTGCGATCACAGCTGTGTATGTGAGTGTGGATGGACTTTCACTGGGAAAAGCGGTCAGCGCAGGGGGTCCTCTATATGTGCTGCTTTGGGATCCAACGCTTTACGCTACTGGACTGCACACTATCAGAGTTAAAGTGGAGGACTCGGCAGGTCGCTCAAAAGTGCGAGAGCAGCAGTTCACACTGGAGGAGGACCTCACGCCCAGCTTTGGCTTCATGCAGTCCTTCATCCTCCTCACAGACCACTACATACTGGCACGGATTGGCTTTGTGGCAATAGTCTTACTAAACCTTGGTGGGCTTGTACTCTTCAGATTTATGCCTGTATCTTCAACGAGAGGGCTGTTTTTTCAAGTGCTGATGCCCCTGCATCTTGTCAGTAAGAGCAACGTGTTCTTCTACTCTCTGCTGCTGTTCAACCTGTGTACGGCATTAGGTCCATGGTTCATTGGGGAAGTCATTGATGGACACAATGGAGCCTGCTTTGCTTTTGGCGTGTTTGTGGATGGGCATTTCCTTGAAGGCAGTCTGACATATGTTGTGGGAGTCATACAGGTGCTTTTCTTCAATATGCCTCTCACTTATTACCTCTGCTGGAGTCTTCACCACAGGTGTCGTGGCACCAACTTCCGCTCACAGTTCTGCCGGCCGGGCTGCCGATGGAGGACTCTGGCGATGCACTTGGGCATGCTGGTCCTCATGATCTGGCAAGCCTATTCTTGCTACTTCCTGCTGGAGACCTATGGGCCACTGGCCTTCTTCCTGTCTCCCGTACGTACCTGGGCCTTTCTCATGGGCCTGCTGTTGGTGTACAGGGCATGGTGGGGAACACCTCCTCGTTTCTCCGATGGCAGCAAAACCAACCGGCCATTGTGATGGTGACCGTTGAAGAGAGGCCTTCACCTGTATCGTTGTTTTGTGCCAAGCTCTTCCCTCCTTTCGCCGCTGTATTCGCGGTCATCAAATTGCCAGTCATTTCCATTACAGATTAGCATAGCGAAAATAGTCTTCAGTTAATATACATATCCGTTGTATGGAGCGATGATGGCATCACACGTGGATGACGGAGCCGTTTAAAACCTTTGACACTGGTAGCTTTTATAGCCAATTCCCACCATTGTGAACCCATGCAGTGTCCTAACAGATGTGTGTGGTAGAGCATACCAATTACTTTGATAAACTGCACATTATGTACTTGTCAAATTATGTTTGTTTTTATGTGTGAGGAGCAATCAAGAAAGGAATACGACTGCCTGATATTCTTATCTGCATGAAACTGCCACTTCACTGAGAGGTCATTCAAAATGGATCCTCTCAAATGGTTTTTAAAGCATATAAAACACACTGTAAAGAGATATCCATTTCAAAAAATCCTTACGCCAGTAGACAATAATATGTAAAGGATAATTTAAGGGATGAAGCTGGTCATTGTCGCAAATTAACTTTGTTCCAGACAGAATCATATACCACTCCACCAATGAAAATAATTTCAAAAGAAGCCAAAGCATCAAGCTTTGCACGTCACACCAAGCAACAAACAGATTGGAGTTGTGTATGTGATTGTAATGGGACACTGTTCAGCCAATCAGATTAGACAATCCGAACTATAATGATCAGCTGACTGCACATTATCCCCCCTTATTACATGACATAAAATTTGGGCATTTTTTAAGAAAAATCTGTACTGCGATACAAGGGACATGAAATTGCCTGTGACAATGTTAAATTGTATAGTTTAGTGGTTATTATACAAAAATATTTGATGTAAAATGCCAACATTGACCAGAATTTGTCAGAATTTAAGGATTAGTTCACCCAAAAAAATTAAA

Function

symbol description
tmem62 Predicted to enable hydrolase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human TMEM62 (transmembrane protein 62).

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_01401358_01417189.mRNA True 2867 mRNA 0.46 14 1400405 1417189

Neighbor

gene id symbol gene type direction distance location
CI01000062_01361295_01382538 ELMSAN1B coding downstream 17634 1361295 ~ 1382771 (-)
CI01000062_01210373_01227487 MTA1 coding downstream 172918 1210060 ~ 1227487 (-)
CI01000062_01191296_01194695 TMEM229B coding downstream 205710 1190693 ~ 1194695 (-)
CI01000062_01131089_01166027 NA coding downstream 233798 1130865 ~ 1166607 (-)
CI01000062_00963254_00999381 PLEKHH1 coding downstream 401024 963206 ~ 999381 (-)
CI01000062_01419375_01443524 HADHA, HADHAB coding upstream 1898 1419087 ~ 1443699 (-)
CI01000062_01747676_01766964 IMPG1B coding upstream 330487 1747676 ~ 1766964 (-)
CI01000062_01787025_01788167 HTR1E, HTR1B coding upstream 369827 1787016 ~ 1788512 (-)
CI01000062_02087992_02119506 NA coding upstream 670782 2087971 ~ 2120066 (-)
CI01000062_02287961_02292055 NA coding upstream 870194 2287383 ~ 2292092 (-)
G259516 NA non-coding downstream 59907 1332833 ~ 1340498 (-)
G259465 NA non-coding downstream 294495 1019507 ~ 1105910 (-)
G259421 NA non-coding downstream 621425 778684 ~ 778980 (-)
G259419 NA non-coding downstream 638444 761758 ~ 761961 (-)
G259597 NA non-coding upstream 72741 1489930 ~ 1499660 (-)
G259598 NA non-coding upstream 87858 1505047 ~ 1510116 (-)
G259619 NA non-coding upstream 108836 1526025 ~ 1526401 (-)
G259630 NA non-coding upstream 112821 1530010 ~ 1530435 (-)
G259633 NA non-coding upstream 117256 1534445 ~ 1535935 (-)
CI01000062_00000216_00015634 EPRS other downstream 1384693 216 ~ 15712 (-)
G261400 NA other upstream 2528246 3945435 ~ 3957385 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location