CI01000062_02287961_02292055


Basic Information

Item Value
gene id CI01000062_02287961_02292055
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2287383 ~ 2292092 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_02287961_02292055.mRNA
AGAGTAGATTAGATAGCAGCGCTTTACGCTGGCACACATGGACCCGTCCAAAACTGGAGAAGCTACGCTGAGAGGAGCCAGTTCAGGATTGAGAAACGTCTGGCCTCCTTCCAGGCCGCGAAAGAGTGTTGAGCGAGACTTGGAACGGCGCTGGCGCCCTCCTAGCTTGATGGATATGTATAAACAATGCAGACGACCTTATGGCTTCTTCATATTTACAGTAATATCCATATTCCATGAATATTTACTAAACAGTACATATGTGGTACATTTCATGTTCACCTTGGTCAGCAAAAGCAATAAGGCCACAAGGTTGAATCTGAACATGAGATTGTTTGTGTTAATGCATGTATACGTGTATATGCAGAAACTTGTTAACATTGTGGTAGTTGCGGTTCGTGAAGTCATACAGCTCCAGTTTCACCTCCATTGCAGTCTCCGGCCGCTTCAAGCAACTGTAAACTTCCGTTACCACAACGAAAGGCCCGCCTCTCCATTCATTCGACTGGACAATGGAGAAGAAAAAAAGCGAATGACGTTGGGCGCTTTTCTGCTCAGAGTTGATTTTTTTCAACTGCAGGTGCTCAGAGCGCTCCTACAAAAACGCGAGACGCAGCTAAAACGCAAGGTGCCTGGGGCACATAAACAGTGTGCAAAACGCTCACTGACAATAGAAAACAATTTAGTGCAAGAAAACGCGTTCTGTCTGATCGGGGCCTTAGTCTATTCAATGAATTTAGACAGAGTGCATTGTGAAAATGAATTGGCTTTTGGAATTTCTGGCTCCATGTACACATCCTTTATGATCACAGTCCTATTTCTATATGGTCTACAGCCCATGCAACACTTTCAGTGCACACGGACCTCCATTTACCAAAGTAGATGGAAGGCGACAAGTGCTGAACCCTAAGCCAAATCCTCCACTGCTGGGTCCATTTAATCTACACATGGAAATGAAGCCAGTGTTACACGGCCCACTCCGGAGGAGGTCACTTGAGAACTAATCAGACTGATCCATTTATTCAGCTCCCCAAGAAGCGTCTAGTGCATAACACTATGGCAAATGCTCTCCATTCTGTGCTCACTTACCCATGCTCAATTTTTTTAAATGAGGCTGAGGGATCAGACCAGATTCTGCACATGTTTACATAGATGAATCCTGAATATGTGACGGTACTAAGGTGTCTCATGTGACAGGGCCGTTTAAACGAGACGGAGAAGAACATTTAACCTCAACCCTGCTTAATGCACGGAATAACTGCGTCTCCCACTATCTGGAAATTTCATACTGTCCTAGTCATCTGCTGGGGTCAGATATAATTTTCAATATTTTCCAATACATTAGAGTTAATACTCTGGCAGAGAAGTCTATCTGTGATGTCTTTAAACCAATATTTGTGATTAATCACCCGTCATTAATACTGATCTTATTACAAAATACGAATATATGCCAGATTGGATATGGTAATGGTCAGCTCATATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_02287961_02292055.mRNA True 1488 mRNA 0.43 3 2287383 2292092

Neighbor

gene id symbol gene type direction distance location
CI01000062_02087992_02119506 NA coding downstream 167317 2087971 ~ 2120066 (-)
CI01000062_01787025_01788167 HTR1E, HTR1B coding downstream 498871 1787016 ~ 1788512 (-)
CI01000062_01747676_01766964 IMPG1B coding downstream 520419 1747676 ~ 1766964 (-)
CI01000062_01419375_01443524 HADHA, HADHAB coding downstream 843684 1419087 ~ 1443699 (-)
CI01000062_01401358_01417189 TMEM62 coding downstream 870194 1400405 ~ 1417189 (-)
CI01000062_02400091_02406400 CMPK2 coding upstream 107662 2399754 ~ 2406400 (-)
CI01000062_02473721_02477346 IAH1 coding upstream 181442 2473534 ~ 2477346 (-)
CI01000062_02488009_02560794 ASAP2A, ASAP2, ASAP3 coding upstream 195717 2487809 ~ 2562434 (-)
CI01000062_02724898_02725662 ID2A, ID2 coding upstream 431887 2723979 ~ 2726153 (-)
CI01000062_03024898_03029604 EIF2S1A, EIF2S1B, EIF2S1 coding upstream 732787 3024879 ~ 3029696 (-)
G260136 NA non-coding downstream 23142 2264025 ~ 2264241 (-)
G260132 NA non-coding downstream 28957 2258223 ~ 2258426 (-)
G260128 NA non-coding downstream 32582 2254574 ~ 2254801 (-)
G260111 NA non-coding downstream 58874 2228274 ~ 2228509 (-)
G260109 NA non-coding downstream 64081 2223098 ~ 2223302 (-)
G260153 NA non-coding upstream 5293 2297385 ~ 2297588 (-)
G260170 NA non-coding upstream 29336 2321428 ~ 2321655 (-)
G260171 NA non-coding upstream 30166 2322258 ~ 2322478 (-)
G260174 NA non-coding upstream 39774 2331866 ~ 2348295 (-)
G260187 NA non-coding upstream 61352 2353444 ~ 2353764 (-)
CI01000062_00000216_00015634 EPRS other downstream 2271671 216 ~ 15712 (-)
G261400 NA other upstream 1653343 3945435 ~ 3957385 (-)

Expression


Co-expression Network