CI01000062_04005001_04005527



Basic Information


Item Value
gene id CI01000062_04005001_04005527
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 4004611 ~ 4005527 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000062_04005001_04005527.mRNA
GAAAGACGTCCTATAGTGTCCCATCTGATCAGAATGAAATTATGCAAGAACTCTACAAGAACGGCCCAGTAGAGGGAGCCTTCACTGTGTATGAGGACTTCCTGCTGTATAAATCTGGTGTATATCAGCACATTAGTGGATCTGTATTAGGTGGTCATGCCATTAAGATCCTGGGCTGGGGAGAGGAGAATGGCGTCCCCTACTGGCTTGCTGCTAACTCCTGGAACACTGACTGGGGTGATAATGGATTTTTCAAGATTCTCCGAGGTGAGGACCACTGTGGCATTGAATCTGAAATTGTAGCTGGAATCCCGATGCAACCATAAAAAGGCATGAAGAGAGCTGAAATGAAATGCACTGTTCAGAACGAATGTCTTCAACTTAAGCTGACTACCATCCTCTGTGGCCATGATACGTTGAGTATTGTTAATCAATGATTGAGTTTTAAGTCTTTTTAGACCGGGGCTCCCGATCAGGGTTTGTTTTAGTGGGTATTTTTTTATTTTTTTTTTTTTTTATTGGAGTGACGCTTTCATGCACCATGACATGTGCAGTCCAGGTCATTGGAGTCAGTTTTAGACCATTGTCTATAGTTTGAGCACAACTTGATGCCTCAGCCACATTTTCCCTGTATGTTTGACTTTTTTAAAATTTTGCTTGGGTTGAATGATTTTTACTTAATTTTGTTGTTAATGGATTGTCTAAAGTGTAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000062_04005001_04005527.mRNA True 716 mRNA 0.41 3 4004611 4005527

Neighbor


gene id symbol gene type direction distance location
CI01000062_03837446_03838592 NA coding downstream 165836 3837162 ~ 3839062 (-)
CI01000062_03788892_03789185 NA coding downstream 214995 3788452 ~ 3789616 (-)
CI01000062_03619844_03628631 SNX9A coding downstream 375980 3619002 ~ 3628631 (-)
CI01000062_03601436_03604051 POMCA coding downstream 400268 3601294 ~ 3604343 (-)
CI01000062_03556433_03560289 DNAJC27, DNAJC27.S, DNAJC27.L coding downstream 443598 3556203 ~ 3561013 (-)
CI01000062_04005972_04008217 NA coding upstream 389 4005916 ~ 4008380 (-)
CI01000062_04021845_04022218 EVA1A coding upstream 15950 4021477 ~ 4022218 (-)
CI01000062_04054548_04067692 GCFC2 coding upstream 48940 4054467 ~ 4067970 (-)
CI01000062_04070271_04080873 YWHAZ, 1433B, YWHAQ, YWHAQA, YWHAQB, YWHAB coding upstream 64744 4070271 ~ 4080973 (-)
CI01000062_04168268_04168705 NA coding upstream 162741 4168268 ~ 4169119 (-)
G261411 NA non-coding downstream 3958 3999421 ~ 4000653 (-)
G261397 NA non-coding downstream 80605 3922014 ~ 3924006 (-)
G261249 NA non-coding downstream 122074 3879044 ~ 3882537 (-)
G261251 NA non-coding downstream 152558 3846434 ~ 3852053 (-)
G261417 NA non-coding upstream 10201 4015728 ~ 4015943 (-)
G261419 NA non-coding upstream 11596 4017123 ~ 4017369 (-)
G261380 NA non-coding upstream 81815 4087342 ~ 4088434 (-)
G261429 NA non-coding upstream 84277 4089804 ~ 4090008 (-)
G261430 NA non-coding upstream 84730 4090257 ~ 4090510 (-)
G261400 NA other downstream 47226 3945435 ~ 3957385 (-)
CI01000062_00000216_00015634 EPRS other downstream 3988899 216 ~ 15712 (-)

Expression



Co-expression Network