CI01000062_04198997_04247699 (ADAM12)


Basic Information

Item Value
gene id CI01000062_04198997_04247699
gene name ADAM12
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 4198471 ~ 4247955 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_04198997_04247699.mRNA
AGCCTCCAATGGACCACTTGAGACAGATTCAACCAAGTAACTAACTAAAGGGCATTTTTGTAGATTTGTATTGTATGCACAAATTTGAATAAAAAATATGATTTGTTTCAGGTGACTTTTAATGAATAGATTGAGTGACTCATCCACAAGTTGCTTATAACACACACAAAACTGGTGCACTTACTGGTGTAACCTGCAGAATGGGTCACTGAATGAATTAGTGAACAAATCTGAACGTTATTTGGTGAACAGATTCATGAATCCAAATCCCAGTCACTACACTCTGGTGGACTCTCTGGTGTGTTTAGTTTGTAATGAAGGGTTGATTACAAGGGTTGATGTGCTCTTTTATGTTTGGCAGCATAAACGGGATGTTCAGAAGACCACCAAATATGTGGAGCTCATCATTGTAGCAGACAACAGAGAGTGCCTCCACCCTACTGTAATGATGACTTTTGAGTGCTCTTTAGAATGTGCCACACTTCTGATTATGTCCTTACAAATGACAGTTGAAGATATTGTCAGATTGTTTAAAAATCCATCTAGACTACCATCTTATACTCGTTTCAGTATATCTCTCATCTCACTTATGTATTTCTTTCCCTATCAGTTCCAGAAACAAGGAAAAGATGTGGAGAAGGTTAAGCAAAGGCTTGCTGAGATCGCCAATTATGTGGACAAGTTTTACAGAGTGCTGAACATTCGTGTAGCTCTGGTGGGACTGGAGGTGTGGAGTGATGCCGATAAGTGTGCAGTTACCCAAGACCCCTTCACAACCCTGCATGAGTTTTTGGACTGGAGAAAACTTAAACTGCTGCCACAGCGTCCACATGATAACGCCCAACTTATTAGTGGGGTGTACTTCCAGGGCACCACAATAGGCATGGCTCCCATCATGAGTATGTGTACCGCTGAGCAGTCAGGAGGCATTGTCATGATGATGAAGAGAACAGATAGAGGAAGGAGAATAAGAGAAGTGCTTGTATGTGTGTTTTATGGCAAGGTTGAAAGAGATTTTAAAAGAGATCACTCGGACAATCCTCTGGGAGCTGCTGTGACTTTGGCCCATGAGTTGGGCCATAATTTTGGAATGAACCACGACACACCAGAGCGAGGATGCGGCTGTAGGATGACCGTAGATCGTGGCGGCTGCATCATGACCCCTTCTACAGGGTACCCATTCCCCACGGTGTTCAGTACGTGTAGTAAGAAGGATCTGGTGGCTAGTCTGGAGAAGGGAGTGGGCATGTGTTTGTATAATATGCCTGAAGTCAAAATGCTCTACGGGGGACAGAAATGCGGCAACGGATACATTGAGGAAGGAGAGGAGTGTGACTGTGGAGAGCCAGAGGAGTGTCTGAACCCCTGCTGTAACGCTACGACCTGCACTCTTAAGGGAGATGCTGTGTGTGCCCATGGACAGTGCTGTGAAGACTGCCAGTTAAAACCAGCTGGGACTCCTTGTAGAGAGTCCAGTAACTCCTGTGACTTACCTGAGTTCTGCACCGGTACCAACCCCCACTGCCCTGCCAATGTGTACCTGCACGATGGGCATTTGTGCCACAGTATGGATGGTTACTGCTACAATGGCATCTGTCAGACTCATGAGCAGCAATGCATTACTCTGTGGGGTCCAGGAGCGAAACCTGCCCCGGGGATCTGTTTTGAAAGGGTAAACTCTGCAGGTGATCCCTATGGAAATTGTGGAAAAGACTCTAAAGGCTCCTTTGCTAAATGTGAAGCAAGGGATGCTAGATGTGGGAAAATTCAGTGCCAAGGAGGTGCCAATAGGCCAGTGATCGGAACCAATGCAGTTTCCATAGAGACAAACATACCTCTGCAGGAGGGCGGCCGTCTTCTGTGCCGAGGAACACACGTGTACCTGGGTGATGATATGCCTGATCCGGGACTGGTGTTGGCAGGCACTAAGTGTGCTGAAGGAATGATCTGTTTGAACAGGCAGTGTCAGAATGTCAGTGTGTTTGGAGTGCACAAGTGCTCTGGGAAGTGTAATGGAAGAGGGGAATGCAACAACAAGAAGAACTGCCATTGTGAAGCTCACTGGGCACCTCCTTTCTGTGATAGGGCGGGGTTTGGTGGAAGCGTTGACAGTGGACCAATGAGACAAGCCGCTGACAGCAGCGCCGTGGCCGTGGGCGCGCTGGTCACCCTCCTTTGCTTGCTGTCGGCGGGACTGATTGTGTGCCTGAAGAGGAAAGCGCTGGTTCAGATGCTCTGCATCAATAAGAAGAGCGCCATTCAAAAGCTAAGATCAGTTGGGCGAAAGCGAGCAACCAGCTCCCCACAGACCCAGTCAGTCTTCAGGGTCTCACCTCAGCACAAGCCCTCCTCTTTACCTTTACACTCCCGATGTGACAAGACATCCCATCCCAGTTCGGAGCCTCTCCTCCCTCCACATAACTTCCACAGTTTGCGTCGACAGCCTGAATGTCCCACCCGCTGCCAGCCCATCCACATCAGCCACCCCATGCCCATCACACTGGGCGTCAGCATGGGCTCAGGTCTGCAGCCTCTGCCCTCAGTCCCGCCTCATAGGACTCTGGTCTCACACACACACTCGCCGGGCAGAGCGGCAGGCTTCCATACACTCCCACGCCAGCTTCCCTACACAAACAACCAGGTATGTGGTTTAGACGATAAGTGCTGCTCGGGGACACTGGCAGGATATGCTATCAGACAGCATGAAGAAGAACATCTGTTGCTTTGAATCTCAGCTCACTTCTCCGCACTGCAGTGAACTGACTGTGGTTAGATTCAGCATCCTAGAAAGTCTCACATCAAGGAGACATTTATCTTGATAAATAAGTGCGAGATGGGTATTTTTACGATAACACGTTGTACTCAGAAATAACAAACACACCATAAAGGTTAATCCATAGGATAGGTATACTACATTCACTTTAAAAAGGCATTAAAGGGATAGCTCCCCCAAAAAAGAAAGTAATTACAAAGAATGTTTGTAACCAAGCAGATCTCGCCCCCCATTGACTACCATAGTATTTTTTTTCCTACTATGGTAGTCAATGGGGGGCGAGATCTGCTAGGTTACAAACATTCTTCCAGTCAGATATATTTCAAGTAAGCATAGCTGTTGAAAATTTCCTTTAGTCCCTCAGTTTGTAAAAGCAAATATGTGCTGTTTTGTCTGTCTAAACAAAACTATACATGTTAGCATGAGACTAGCATTGAAAAAATAATTTACTAACCATGTCTGTGCAGTTATCTCCAATAAA

Function

symbol description
adam12 Enables SH3 domain binding activity. Involved in positive regulation of angiogenesis. Located in nucleoplasm and plasma membrane. Implicated in osteoarthritis.

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_04198997_04247699.mRNA True 3254 mRNA 0.47 17 4198471 4247955

Neighbor

gene id symbol gene type direction distance location
CI01000062_04170036_04182524 DHX32B coding downstream 15886 4169752 ~ 4182585 (-)
CI01000062_04168268_04168705 NA coding downstream 29352 4168268 ~ 4169119 (-)
CI01000062_04070271_04080873 YWHAZ, 1433B, YWHAQ, YWHAQA, YWHAQB, YWHAB coding downstream 117498 4070271 ~ 4080973 (-)
CI01000062_04054548_04067692 GCFC2 coding downstream 130501 4054467 ~ 4067970 (-)
CI01000062_04021845_04022218 EVA1A coding downstream 176253 4021477 ~ 4022218 (-)
CI01000062_04281826_04306521 NA coding upstream 33732 4281687 ~ 4306849 (-)
CI01000062_04318060_04327149 NA coding upstream 69450 4317405 ~ 4327452 (-)
CI01000062_04394309_04427992 FAM196AB coding upstream 146286 4394241 ~ 4427992 (-)
G261462 NA non-coding downstream 47003 4151135 ~ 4151468 (-)
G261430 NA non-coding downstream 107961 4090257 ~ 4090510 (-)
G261429 NA non-coding downstream 108463 4089804 ~ 4090008 (-)
G261380 NA non-coding downstream 110037 4087342 ~ 4088434 (-)
G261419 NA non-coding downstream 181102 4017123 ~ 4017369 (-)
G261529 NA non-coding upstream 59944 4307899 ~ 4308367 (-)
G261544 NA non-coding upstream 87341 4335296 ~ 4335653 (-)
G261559 NA non-coding upstream 113032 4360987 ~ 4361217 (-)
G261576 NA non-coding upstream 132145 4380100 ~ 4380551 (-)
G261400 NA other downstream 241086 3945435 ~ 3957385 (-)
CI01000062_00000216_00015634 EPRS other downstream 4182759 216 ~ 15712 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location