G258329



Basic Information


Item Value
gene id G258329
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 20514 ~ 20882 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU293263
CTTTCCACAAGGTTTAGGAGTGAGTTTATGGGAATTTTTGACCATTCTTCTAGAAGCGCATTTGTGAGGTCAGGCAGTGATGTTGGCGAGAAGGCCTCTCCGCTCTAATTCATCCCAAAGGTGTTCTGTCGGGTTGAGGTCAGGACTCTGTGCAGGCCAGTCAAGTTCCTCCACACCAAACTCGCTCATCCATGTCTTTATGGATCTTGCTTTGTGCACTGGTGCGCAGTCATGTTGGAACAGGAAGGGGCCATCCCCAAACTGTTCCCACAAAGTTGTGAGCATGAAATTGTCCAAAATGTCTTGGTATGCTGAAGCATTAAGAGTTCCTTTCACTGGAACTAAGGGGCCAAGCCCAACCCCTGAAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU293263 True 369 lncRNA 0.48 1 20514 20882

Neighbor


gene id symbol gene type direction distance location
CI01000062_00000216_00015634 EPRS coding downstream 4880 216 ~ 15712 (-)
CI01000062_00205449_00208640 NA coding upstream 184567 205449 ~ 208640 (-)
CI01000062_00215004_00216872 NA coding upstream 193620 214502 ~ 216872 (-)
CI01000062_00459377_00459927 NA coding upstream 438295 459177 ~ 460140 (-)
CI01000062_00491892_00492929 NA coding upstream 470967 491849 ~ 493776 (-)
CI01000062_00501459_00565291 CCDC88C coding upstream 480577 501459 ~ 565291 (-)
G258369 NA non-coding upstream 92674 113556 ~ 113896 (-)
G258387 NA non-coding upstream 115718 136600 ~ 136845 (-)
G258397 NA non-coding upstream 124628 145510 ~ 145818 (-)
G258400 NA non-coding upstream 126712 147594 ~ 148028 (-)
G258532 NA non-coding upstream 151120 172002 ~ 172393 (-)
G261400 NA other upstream 3924553 3945435 ~ 3957385 (-)

Expression



Co-expression Network