G258532



Basic Information


Item Value
gene id G258532
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 172002 ~ 172393 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU293539
GTGAAACTTGTATATTATATTCATTCATTACACACAGACTGATATATTTCAAATGTTTATTTCTTTTAATTTTGATGATTATAACTGACAACTAAGGAAAATCCCAAATTCAGTATCTCAGAAAATTAGAATATTACTTAAGACCAATACAAAGAAAGGATTTTTAGAAATCTTGGCCAACTGAAAAGTATGAACATGAAAAGTATGAGCATGTACAGCACTCAATACTTAGTTGGGGCTCCTTTTGCCTGAATTACTGCAGCAATGCAGCGTGGCATGGAGTCGATCAGTCTGTGGCACTGCTCAGGTGTTATAAGAGCCCAGGTTGCTCTGATAGTGGCCTTCAGCTCTTCTGCATTGTTGGGTCTGGCATATCGCATCTTCCTCTTCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU293539 True 392 lncRNA 0.38 1 172002 172393

Neighbor


gene id symbol gene type direction distance location
CI01000062_00000216_00015634 EPRS coding downstream 156368 216 ~ 15712 (-)
CI01000062_00205449_00208640 NA coding upstream 33056 205449 ~ 208640 (-)
CI01000062_00215004_00216872 NA coding upstream 42109 214502 ~ 216872 (-)
CI01000062_00459377_00459927 NA coding upstream 286784 459177 ~ 460140 (-)
CI01000062_00491892_00492929 NA coding upstream 319456 491849 ~ 493776 (-)
CI01000062_00501459_00565291 CCDC88C coding upstream 329066 501459 ~ 565291 (-)
G258400 NA non-coding downstream 23974 147594 ~ 148028 (-)
G258397 NA non-coding downstream 26184 145510 ~ 145818 (-)
G258387 NA non-coding downstream 35157 136600 ~ 136845 (-)
G258369 NA non-coding downstream 58106 113556 ~ 113896 (-)
G258329 NA non-coding downstream 151120 20514 ~ 20882 (-)
G258549 NA non-coding upstream 65107 237500 ~ 237732 (-)
G258603 NA non-coding upstream 87462 259855 ~ 260168 (-)
G258703 NA non-coding upstream 236522 408915 ~ 409146 (-)
G261400 NA other upstream 3773042 3945435 ~ 3957385 (-)

Expression



Co-expression Network