G258549


Basic Information

Item Value
gene id G258549
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 237500 ~ 237732 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU293559
CAAATGTTTCTATATTCCTGGTGTATTTGGATGCTAAACTATTATTTATTATGTAAACTACAAGTACAAGTAACGCGAGTTATGTAATCAGATTACTTTTTCAAGTAACTAGTAAAGTAACACATTACTTTTAATTTTACAACAAAATATCTGAGTTACTATTTCAAAAAAGTAACGCAAGTTACTTTGTTTTCCCATTTATTGACTGACAGCTCTCCTGTCCCCATGTTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU293559 True 233 lncRNA 0.30 1 237500 237732

Neighbor

gene id symbol gene type direction distance location
CI01000062_00215004_00216872 NA coding downstream 20628 214502 ~ 216872 (-)
CI01000062_00205449_00208640 NA coding downstream 28860 205449 ~ 208640 (-)
CI01000062_00000216_00015634 EPRS coding downstream 221866 216 ~ 15712 (-)
CI01000062_00459377_00459927 NA coding upstream 221445 459177 ~ 460140 (-)
CI01000062_00491892_00492929 NA coding upstream 254117 491849 ~ 493776 (-)
CI01000062_00501459_00565291 CCDC88C coding upstream 263727 501459 ~ 565291 (-)
CI01000062_00576651_00595216 SPTB coding upstream 338680 576412 ~ 595867 (-)
CI01000062_00596852_00598234 NA coding upstream 358573 596305 ~ 598234 (-)
G258532 NA non-coding downstream 65107 172002 ~ 172393 (-)
G258400 NA non-coding downstream 89472 147594 ~ 148028 (-)
G258397 NA non-coding downstream 91682 145510 ~ 145818 (-)
G258603 NA non-coding upstream 22123 259855 ~ 260168 (-)
G258703 NA non-coding upstream 171183 408915 ~ 409146 (-)
G259368 NA non-coding upstream 451981 689713 ~ 728536 (-)
G259414 NA non-coding upstream 490892 728624 ~ 728858 (-)
G259416 NA non-coding upstream 506363 744095 ~ 744301 (-)
G261400 NA other upstream 3707703 3945435 ~ 3957385 (-)

Expression


Co-expression Network