G258703


Basic Information

Item Value
gene id G258703
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 408915 ~ 409146 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU293717
TATACAGTATCTCACAGAAGTGAGTACACCCCTCACATTTTTGTAAATATTTTATTATATCTTTTCATGTGACAACACTGAAGAAATGACACTTTGCTACAATGTAAAGTAGTGAGTGTACAGCTTGTATAACAGTATAAATTTGCTGTCCCCTCAAAATAACTCAACACACAGCCATTAATGTCTAAACCGCTGGCCACAAAAGTGAGTACACCCCTAAGTAAAAATGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU293717 True 232 lncRNA 0.36 1 408915 409146

Neighbor

gene id symbol gene type direction distance location
CI01000062_00215004_00216872 NA coding downstream 192043 214502 ~ 216872 (-)
CI01000062_00205449_00208640 NA coding downstream 200275 205449 ~ 208640 (-)
CI01000062_00000216_00015634 EPRS coding downstream 393281 216 ~ 15712 (-)
CI01000062_00459377_00459927 NA coding upstream 50031 459177 ~ 460140 (-)
CI01000062_00491892_00492929 NA coding upstream 82703 491849 ~ 493776 (-)
CI01000062_00501459_00565291 CCDC88C coding upstream 92313 501459 ~ 565291 (-)
CI01000062_00576651_00595216 SPTB coding upstream 167266 576412 ~ 595867 (-)
CI01000062_00596852_00598234 NA coding upstream 187159 596305 ~ 598234 (-)
G258603 NA non-coding downstream 148747 259855 ~ 260168 (-)
G258549 NA non-coding downstream 171183 237500 ~ 237732 (-)
G258532 NA non-coding downstream 236522 172002 ~ 172393 (-)
G259368 NA non-coding upstream 280567 689713 ~ 728536 (-)
G259414 NA non-coding upstream 319478 728624 ~ 728858 (-)
G259416 NA non-coding upstream 334949 744095 ~ 744301 (-)
G259417 NA non-coding upstream 338718 747864 ~ 748114 (-)
G259419 NA non-coding upstream 352612 761758 ~ 761961 (-)
G261400 NA other upstream 3536289 3945435 ~ 3957385 (-)

Expression


Co-expression Network