Gene
RNA
| Item | Value |
|---|---|
| gene id | G259417 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000062 |
| NCBI id | null |
| chromosome length | 4496499 |
| location | 747864 ~ 748114 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU294531 | True | 251 | lncRNA | 0.43 | 1 | 747864 | 748114 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000062_00657853_00674050 | CDAN1 | coding | downstream | 73674 | 657363 ~ 674190 (-) |
| CI01000062_00606761_00645828 | STARD9 | coding | downstream | 102036 | 605175 ~ 645828 (-) |
| CI01000062_00596852_00598234 | NA | coding | downstream | 149630 | 596305 ~ 598234 (-) |
| CI01000062_00576651_00595216 | SPTB | coding | downstream | 151997 | 576412 ~ 595867 (-) |
| CI01000062_00501459_00565291 | CCDC88C | coding | downstream | 182573 | 501459 ~ 565291 (-) |
| CI01000062_00770718_00777617 | NA | coding | upstream | 22476 | 770590 ~ 777824 (-) |
| CI01000062_00799628_00801034 | NKX2.1, NKX2-1 | coding | upstream | 50931 | 799045 ~ 802500 (-) |
| CI01000062_00808148_00808981 | NKX2.9 | coding | upstream | 59619 | 807733 ~ 809102 (-) |
| CI01000062_00842607_00851041 | SLC25A21 | coding | upstream | 94302 | 842416 ~ 851041 (-) |
| CI01000062_00877361_00878217 | NA | coding | upstream | 127539 | 875653 ~ 878675 (-) |
| G259416 | NA | non-coding | downstream | 3563 | 744095 ~ 744301 (-) |
| G259414 | NA | non-coding | downstream | 19006 | 728624 ~ 728858 (-) |
| G259368 | NA | non-coding | downstream | 19328 | 689713 ~ 728536 (-) |
| G258703 | NA | non-coding | downstream | 338718 | 408915 ~ 409146 (-) |
| G258603 | NA | non-coding | downstream | 487696 | 259855 ~ 260168 (-) |
| G259419 | NA | non-coding | upstream | 13644 | 761758 ~ 761961 (-) |
| G259421 | NA | non-coding | upstream | 30570 | 778684 ~ 778980 (-) |
| CI01000062_00963254_00999381 | PLEKHH1 | non-coding | upstream | 249228 | 963206 ~ 999381 (-) |
| G259465 | NA | non-coding | upstream | 271393 | 1019507 ~ 1105910 (-) |
| G259516 | NA | non-coding | upstream | 584719 | 1332833 ~ 1340498 (-) |
| CI01000062_00000216_00015634 | EPRS | other | downstream | 732152 | 216 ~ 15712 (-) |
| G261400 | NA | other | upstream | 3197321 | 3945435 ~ 3957385 (-) |
