G259630



Basic Information


Item Value
gene id G259630
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 1530010 ~ 1530435 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU294763
CATGTGTGTGATCCGCCAGTCACACAATAAATGAAATCAATTTTCAAACAATCAGTCCCTGGCGGAGCATTAAAGATTTTTGGCAAGTAGCTTCCATGCTTTTTCTATACAATCCCCCCCAAAAAAATGGAAAATACTGTCAAAAAAACATTCAAATCACCTCAACTTTACTGTCATAACACATTTCTGTAGTGACAGTGTGAACATCAGGCATTCACATTAAATATTAACCAACAAACTACTTCATATAGTTATTAGTTTGTCAAAAGAACAGTGTATTAAAAAGTCAAGAAGTCTCTAGAAGGTTCAAAGAGAGGGTAGACTGCCATGAAAACCGATCCACCATAACATTTTACATTCTAAATGACCTAAAGGGGAAAAAAATGAGAAATAAAAAAGTATACCCTGACTACTTCAAATGCAAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU294763 True 426 lncRNA 0.34 1 1530010 1530435

Neighbor


gene id symbol gene type direction distance location
CI01000062_01419375_01443524 HADHA, HADHAB coding downstream 86311 1419087 ~ 1443699 (-)
CI01000062_01401358_01417189 TMEM62 coding downstream 112821 1400405 ~ 1417189 (-)
CI01000062_01361295_01382538 ELMSAN1B coding downstream 147239 1361295 ~ 1382771 (-)
CI01000062_01210373_01227487 MTA1 coding downstream 302523 1210060 ~ 1227487 (-)
CI01000062_01191296_01194695 TMEM229B coding downstream 335315 1190693 ~ 1194695 (-)
CI01000062_01747676_01766964 IMPG1B coding upstream 217241 1747676 ~ 1766964 (-)
CI01000062_01787025_01788167 HTR1E, HTR1B coding upstream 256581 1787016 ~ 1788512 (-)
CI01000062_02087992_02119506 NA coding upstream 557536 2087971 ~ 2120066 (-)
CI01000062_02287961_02292055 NA coding upstream 756948 2287383 ~ 2292092 (-)
CI01000062_02400091_02406400 CMPK2 coding upstream 869319 2399754 ~ 2406400 (-)
G259619 NA non-coding downstream 3609 1526025 ~ 1526401 (-)
G259598 NA non-coding downstream 19894 1505047 ~ 1510116 (-)
G259597 NA non-coding downstream 30350 1489930 ~ 1499660 (-)
G259516 NA non-coding downstream 189512 1332833 ~ 1340498 (-)
G259465 NA non-coding downstream 424100 1019507 ~ 1105910 (-)
G259633 NA non-coding upstream 4010 1534445 ~ 1535935 (-)
G259632 NA non-coding upstream 10667 1541102 ~ 1545059 (-)
G259635 NA non-coding upstream 18060 1548495 ~ 1548697 (-)
G259626 NA non-coding upstream 47309 1577744 ~ 1589919 (-)
G259675 NA non-coding upstream 117822 1648257 ~ 1648457 (-)
CI01000062_00000216_00015634 EPRS other downstream 1514298 216 ~ 15712 (-)
G261400 NA other upstream 2415000 3945435 ~ 3957385 (-)

Expression



Co-expression Network