G259675


Basic Information

Item Value
gene id G259675
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 1648257 ~ 1648457 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU294809
GCTATATAGCATCTTAACCACCCCAAAGAACCACTGAAGAACCATACAGGGGCTTAACAGGTTCTGTATATGGTAGCAGTGCTATATAGCACCTCAGTCATCCCAAAGAACCGCTGAAGAACCACTGAAGCACCAAGATTTGGTGCTATACAGCACTTAAAGTGGTTCCCCTATGATTACGAGCCAAAGAACCACTTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU294809 True 201 lncRNA 0.44 1 1648257 1648457

Neighbor

gene id symbol gene type direction distance location
CI01000062_01419375_01443524 HADHA, HADHAB coding downstream 204558 1419087 ~ 1443699 (-)
CI01000062_01401358_01417189 TMEM62 coding downstream 231068 1400405 ~ 1417189 (-)
CI01000062_01361295_01382538 ELMSAN1B coding downstream 265486 1361295 ~ 1382771 (-)
CI01000062_01210373_01227487 MTA1 coding downstream 420770 1210060 ~ 1227487 (-)
CI01000062_01191296_01194695 TMEM229B coding downstream 453562 1190693 ~ 1194695 (-)
CI01000062_01747676_01766964 IMPG1B coding upstream 99219 1747676 ~ 1766964 (-)
CI01000062_01787025_01788167 HTR1E, HTR1B coding upstream 138559 1787016 ~ 1788512 (-)
CI01000062_02087992_02119506 NA coding upstream 439514 2087971 ~ 2120066 (-)
CI01000062_02287961_02292055 NA coding upstream 638926 2287383 ~ 2292092 (-)
CI01000062_02400091_02406400 CMPK2 coding upstream 751297 2399754 ~ 2406400 (-)
G259626 NA non-coding downstream 58338 1577744 ~ 1589919 (-)
G259635 NA non-coding downstream 99560 1548495 ~ 1548697 (-)
G259632 NA non-coding downstream 103198 1541102 ~ 1545059 (-)
G259633 NA non-coding downstream 112322 1534445 ~ 1535935 (-)
G259630 NA non-coding downstream 117822 1530010 ~ 1530435 (-)
G259705 NA non-coding upstream 89014 1737471 ~ 1738265 (-)
G259725 NA non-coding upstream 143829 1792286 ~ 1792555 (-)
G259737 NA non-coding upstream 169352 1817809 ~ 1818152 (-)
G259745 NA non-coding upstream 185602 1834059 ~ 1834290 (-)
G259747 NA non-coding upstream 189255 1837712 ~ 1837921 (-)
CI01000062_00000216_00015634 EPRS other downstream 1632545 216 ~ 15712 (-)
G261400 NA other upstream 2296978 3945435 ~ 3957385 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030408 NA non-coding NC_007116.7 CM002889.2 47839130 ~ 47840131 (+)