G260111



Basic Information


Item Value
gene id G260111
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2228274 ~ 2228509 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU295280
GAGTGTTAAAGAACGCGACACACACGACTCCTGAAAATCCTGTAGAATTCAACGAATCAGATGATGACTTTGAAACTCTTCAGGAGTGTTTCCAATTTTGTGTGCCATATGCATCAGACGTTCAGCCAGCGGACTATAAGTGTGAGGTCTGAGGCTGAGACTATAGAAACTAAGGTAAACTGAAACTGAACATAGGCACAGCAAGACAAAATAATATCAAAATTAAAGTCTAAGAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU295280 True 236 lncRNA 0.40 1 2228274 2228509

Neighbor


gene id symbol gene type direction distance location
CI01000062_02087992_02119506 NA coding downstream 108208 2087971 ~ 2120066 (-)
CI01000062_01787025_01788167 HTR1E, HTR1B coding downstream 439762 1787016 ~ 1788512 (-)
CI01000062_01747676_01766964 IMPG1B coding downstream 461310 1747676 ~ 1766964 (-)
CI01000062_01419375_01443524 HADHA, HADHAB coding downstream 784575 1419087 ~ 1443699 (-)
CI01000062_01401358_01417189 TMEM62 coding downstream 811085 1400405 ~ 1417189 (-)
CI01000062_02287961_02292055 NA coding upstream 58874 2287383 ~ 2292092 (-)
CI01000062_02400091_02406400 CMPK2 coding upstream 171245 2399754 ~ 2406400 (-)
CI01000062_02473721_02477346 IAH1 coding upstream 245025 2473534 ~ 2477346 (-)
CI01000062_02488009_02560794 ASAP2A, ASAP2, ASAP3 coding upstream 259300 2487809 ~ 2562434 (-)
CI01000062_02724898_02725662 ID2A, ID2 coding upstream 495470 2723979 ~ 2726153 (-)
G260109 NA non-coding downstream 4972 2223098 ~ 2223302 (-)
G259847 NA non-coding downstream 72027 2156048 ~ 2156247 (-)
G259843 NA non-coding downstream 79089 2148896 ~ 2149185 (-)
G259842 NA non-coding downstream 79478 2148566 ~ 2148796 (-)
G259841 NA non-coding downstream 80391 2147648 ~ 2147883 (-)
G260128 NA non-coding upstream 26065 2254574 ~ 2254801 (-)
G260132 NA non-coding upstream 29714 2258223 ~ 2258426 (-)
G260136 NA non-coding upstream 35516 2264025 ~ 2264241 (-)
G260153 NA non-coding upstream 68876 2297385 ~ 2297588 (-)
G260170 NA non-coding upstream 92919 2321428 ~ 2321655 (-)
CI01000062_00000216_00015634 EPRS other downstream 2212562 216 ~ 15712 (-)
G261400 NA other upstream 1716926 3945435 ~ 3957385 (-)

Expression



Co-expression Network