G260167


Basic Information

Item Value
gene id G260167
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2483099 ~ 2484159 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU295344
ACTGTTCAGTTTAACACATTCTTCAAAATATCTTCCTTTATGTTCATCAGAAGAAAGAAATGTATACAGGTTTAGAACAACTTGAGGGTGAGTAAATGATGACAGAATTTTCATTCAGAACTATCCCTTTAAATTCATTGAAAGTCTTTGGGATGTGCTGGAGGAGACTTTAGAGTGCTCACCTCTTGCATTGTCAATACAAGATCCTGATACAAGACCAATAATTGATGTACCTCTTACTTTCAATGAATTTAAGGTCTTGACTCCAGGTGCCATGATGTGTCTTCCTACATGGTTGTTTAAGAAATGAAAAGCTACACACTCCATCAAAGAACCATTGCCAAACGTATAACATGCTAGAAACATAATAATCACTGCAATAATGATCCAGTCATAAACTCTTAAGTATTTGCCTATTTAAACCCAAACAGTGACTTGGCAGTGTATGTATTTACACCGACCAAGATGTGCCCTGAATCTCCCAGCTTTGGTTGGCCAGATAGGTGTTCCCTGTACCAGTAATATCTCTGCATCTCTTACTTTTTCTAGCGCTCTAATTGTATTCCAGAGGAAATTAAAATCCCTCATGTCATTTTCCCCTCACAACACTTCTCTTAATCCTTTCTAAAGCTTTGAAATGCTCATCCTGTAACTGTGCAGGAGCGTTTTTAATGTCATGAGTGTTTGATGTGGTTGCAGAGCAACTTAATAGAGTCTGTTATGTAACTTTTAATTACAGTCATGTTAGTCTTGATTGAGCTCGGACCAGAGTGATCTGTAACTCGGGCAGTGACGGGATAATTACTATCCTGTGTTCAGTTCACTGTATACAGACGGCACCTGGCCGGCTGTGATTGTAAATAAATGTAGACTTTGCTTTGTGCATATTTAATTGTAAACAGAGAGCTAAACTGACAATGACTGATGTTTTGTTAGATAAGACTGTTACACTTAACTTAGATGAAAACAACCTCTATTCACCCGTTGACCATAAACATCATTGATGCTAATATATAAATATATGTACAAATAAATGGGAAAACTGGAATTAAAAAAAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295344 True 1061 lncRNA 0.37 1 2483099 2484159

Neighbor

gene id symbol gene type direction distance location
CI01000062_02473721_02477346 IAH1 coding downstream 5753 2473534 ~ 2477346 (-)
CI01000062_02400091_02406400 CMPK2 coding downstream 76699 2399754 ~ 2406400 (-)
CI01000062_02287961_02292055 NA coding downstream 191007 2287383 ~ 2292092 (-)
CI01000062_02087992_02119506 NA coding downstream 363033 2087971 ~ 2120066 (-)
CI01000062_01787025_01788167 HTR1E, HTR1B coding downstream 694587 1787016 ~ 1788512 (-)
CI01000062_02488009_02560794 ASAP2A, ASAP2, ASAP3 coding upstream 3650 2487809 ~ 2562434 (-)
CI01000062_02724898_02725662 ID2A, ID2 coding upstream 239820 2723979 ~ 2726153 (-)
CI01000062_03024898_03029604 EIF2S1A, EIF2S1B, EIF2S1 coding upstream 540720 3024879 ~ 3029696 (-)
CI01000062_03033192_03047656 MPP5A, MPP5 coding upstream 548488 3032647 ~ 3047847 (-)
CI01000062_03067891_03127934 GPHNA, GPHNB, GPHN coding upstream 583447 3067606 ~ 3127934 (-)
G260160 NA non-coding downstream 72127 2407028 ~ 2410972 (-)
G260209 NA non-coding downstream 95521 2387246 ~ 2387578 (-)
G260207 NA non-coding downstream 97973 2384754 ~ 2385126 (-)
G260202 NA non-coding downstream 105416 2377209 ~ 2377683 (-)
G260201 NA non-coding downstream 110307 2372577 ~ 2372792 (-)
G260245 NA non-coding upstream 78451 2562610 ~ 2562810 (-)
G260361 NA non-coding upstream 321946 2806105 ~ 2806309 (-)
G260383 NA non-coding upstream 378335 2862494 ~ 2880532 (-)
G260389 NA non-coding upstream 400616 2884775 ~ 2885036 (-)
G260391 NA non-coding upstream 412201 2896360 ~ 2896563 (-)
CI01000062_00000216_00015634 EPRS other downstream 2467387 216 ~ 15712 (-)
G261400 NA other upstream 1461276 3945435 ~ 3957385 (-)

Expression


Co-expression Network