Gene
RNA
| Item | Value |
|---|---|
| gene id | G261173 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000062 |
| NCBI id | null |
| chromosome length | 4496499 |
| location | 3328690 ~ 3329030 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU296429 | True | 341 | lncRNA | 0.36 | 1 | 3328690 | 3329030 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000062_03211594_03253336 | FUT8A, FUT8 | coding | downstream | 75063 | 3210581 ~ 3253631 (-) |
| CI01000062_03067891_03127934 | GPHNA, GPHNB, GPHN | coding | downstream | 200756 | 3067606 ~ 3127934 (-) |
| CI01000062_03033192_03047656 | MPP5A, MPP5 | coding | downstream | 280843 | 3032647 ~ 3047847 (-) |
| CI01000062_03024898_03029604 | EIF2S1A, EIF2S1B, EIF2S1 | coding | downstream | 298994 | 3024879 ~ 3029696 (-) |
| CI01000062_02724898_02725662 | ID2A, ID2 | coding | downstream | 602537 | 2723979 ~ 2726153 (-) |
| CI01000062_03428921_03431581 | NA | coding | upstream | 99891 | 3428921 ~ 3431581 (-) |
| CI01000062_03436291_03454196 | RIN3 | coding | upstream | 106407 | 3435437 ~ 3454558 (-) |
| CI01000062_03470252_03479300 | SNAP23.1 | coding | upstream | 141071 | 3470101 ~ 3479300 (-) |
| CI01000062_03500344_03507001 | NA | coding | upstream | 170897 | 3499927 ~ 3507331 (-) |
| CI01000062_03511363_03532823 | XDH | coding | upstream | 182326 | 3511356 ~ 3532823 (-) |
| G261149 | NA | non-coding | downstream | 118409 | 3209514 ~ 3210281 (-) |
| G261163 | NA | non-coding | downstream | 129421 | 3199059 ~ 3199269 (-) |
| G261156 | NA | non-coding | downstream | 134782 | 3193388 ~ 3193908 (-) |
| G261141 | NA | non-coding | downstream | 149770 | 3178569 ~ 3178920 (-) |
| G261174 | NA | non-coding | upstream | 170 | 3329200 ~ 3330273 (-) |
| G261182 | NA | non-coding | upstream | 22113 | 3351143 ~ 3351354 (-) |
| G261183 | NA | non-coding | upstream | 22918 | 3351948 ~ 3352178 (-) |
| G261186 | NA | non-coding | upstream | 32680 | 3361710 ~ 3361917 (-) |
| G261187 | NA | non-coding | upstream | 50467 | 3379497 ~ 3379726 (-) |
| CI01000062_00000216_00015634 | EPRS | other | downstream | 3312978 | 216 ~ 15712 (-) |
| G261400 | NA | other | upstream | 616405 | 3945435 ~ 3957385 (-) |
