G261174


Basic Information

Item Value
gene id G261174
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 3329200 ~ 3330273 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU296430
GCGACAAAATCAATCAAAACCACAGCCAATCAGAACGTGTGGGCGGGCTCTCGTGGTAAGTGCGCGGCACCAGAGGTTAATCTTGACGGCACTCACAAGGAAATGGATAAGTAGGCTACATAATCAAATTCACAAATATTACACCATTTAAACATTATTAAAAATACATACTGCATTACTAAAACGATCTTTGTCAGAGAATACACTTGTTTGTCCACAGTTTGAATGTTCTTGTTTCCATTTGTTTAATTTCAAGACCTGAGGTGAATTATCCATTGTTGCTTTTAGTACGGCTACAAAGCTAGGAGTACTATATGATATTCAAACTCACATTACAAGCTTTTAACATTAAATAATGTAAATAAACATTACCTGAGATTATCATTGCCATACTTGTGTTGTTCTTTCAGCTGTGACACCGAAGCAAAATAGAAAACGTTTCTAAAATAGAATCGTCGCGCATCACTGCTAGTTAGGACAAAAACTGATTAACGTGGAAAAGATATCTTTTATCGCATGTCGCGTCGCGTCTGGTTAGGACACGGTGTAAAATGTAAACATAGTTTTTGATTCAGTTATGATTAAATGATGATAGACTTAGTTTTGGATAAAGTGATGGAATCCTTTAAAACGAGTTGAATGCAGCACCTGATATCACATAGCGGAATGAAACCTTTATGTCAAATAAGGTAAACGTGTTAAATAAATGGGATGAAGCTGAACATATTTAATTACATTAAAATCCACTATTTATTCCATTAATTCAATATTCTATTAACCACAAAGGATTTGTAAACATTTGTGCATCATGTAAAATGTGGTAACACTTCATTTAAAGCCTTTACGTATAATGCATTATATCTTTTCATAAATAACTGTAACCAAAGATAAAAATGCATTATATTTGCAGATTTCTTGTTACATTGTTAGTCGTGTTTTGTAACAGTGTGTAACAGTGTATTATGATGTTATAACAATTATTCATGAGATCAAACATTGCATTATTAGGTGCATTACAAGGCATAAGCAAGCAATAAGGTATGAGAGACTGTGCTGAATAAGTCATGGCTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU296430 True 1074 lncRNA 0.34 1 3329200 3330273

Neighbor

gene id symbol gene type direction distance location
CI01000062_03211594_03253336 FUT8A, FUT8 coding downstream 75573 3210581 ~ 3253631 (-)
CI01000062_03067891_03127934 GPHNA, GPHNB, GPHN coding downstream 201266 3067606 ~ 3127934 (-)
CI01000062_03033192_03047656 MPP5A, MPP5 coding downstream 281353 3032647 ~ 3047847 (-)
CI01000062_03024898_03029604 EIF2S1A, EIF2S1B, EIF2S1 coding downstream 299504 3024879 ~ 3029696 (-)
CI01000062_02724898_02725662 ID2A, ID2 coding downstream 603047 2723979 ~ 2726153 (-)
CI01000062_03428921_03431581 NA coding upstream 98648 3428921 ~ 3431581 (-)
CI01000062_03436291_03454196 RIN3 coding upstream 105164 3435437 ~ 3454558 (-)
CI01000062_03470252_03479300 SNAP23.1 coding upstream 139828 3470101 ~ 3479300 (-)
CI01000062_03500344_03507001 NA coding upstream 169654 3499927 ~ 3507331 (-)
CI01000062_03511363_03532823 XDH coding upstream 181083 3511356 ~ 3532823 (-)
G261173 NA non-coding downstream 170 3328690 ~ 3329030 (-)
G261149 NA non-coding downstream 118919 3209514 ~ 3210281 (-)
G261163 NA non-coding downstream 129931 3199059 ~ 3199269 (-)
G261156 NA non-coding downstream 135292 3193388 ~ 3193908 (-)
G261182 NA non-coding upstream 20870 3351143 ~ 3351354 (-)
G261183 NA non-coding upstream 21675 3351948 ~ 3352178 (-)
G261186 NA non-coding upstream 31437 3361710 ~ 3361917 (-)
G261187 NA non-coding upstream 49224 3379497 ~ 3379726 (-)
CI01000062_00000216_00015634 EPRS other downstream 3313488 216 ~ 15712 (-)
G261400 NA other upstream 615162 3945435 ~ 3957385 (-)

Expression


Co-expression Network