Gene
RNA
| Item | Value |
|---|---|
| gene id | G261222 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000062 |
| NCBI id | null |
| chromosome length | 4496499 |
| location | 3484660 ~ 3487235 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| ATP-dependent RNA helicase DDX18-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU296488 | True | 234 | lncRNA | 0.44 | 3 | 3484660 | 3487235 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000062_03470252_03479300 | SNAP23.1 | coding | downstream | 5360 | 3470101 ~ 3479300 (-) |
| CI01000062_03436291_03454196 | RIN3 | coding | downstream | 30102 | 3435437 ~ 3454558 (-) |
| CI01000062_03428921_03431581 | NA | coding | downstream | 53079 | 3428921 ~ 3431581 (-) |
| CI01000062_03211594_03253336 | FUT8A, FUT8 | coding | downstream | 231033 | 3210581 ~ 3253631 (-) |
| CI01000062_03067891_03127934 | GPHNA, GPHNB, GPHN | coding | downstream | 356726 | 3067606 ~ 3127934 (-) |
| CI01000062_03500344_03507001 | NA | coding | upstream | 12692 | 3499927 ~ 3507331 (-) |
| CI01000062_03511363_03532823 | XDH | coding | upstream | 24121 | 3511356 ~ 3532823 (-) |
| CI01000062_03536428_03550126 | NA | coding | upstream | 48164 | 3535399 ~ 3550536 (-) |
| CI01000062_03556433_03560289 | DNAJC27, DNAJC27.S, DNAJC27.L | coding | upstream | 68968 | 3556203 ~ 3561013 (-) |
| CI01000062_03601436_03604051 | POMCA | coding | upstream | 114059 | 3601294 ~ 3604343 (-) |
| G261220 | NA | non-coding | downstream | 480 | 3483104 ~ 3484180 (-) |
| G261187 | NA | non-coding | downstream | 104934 | 3379497 ~ 3379726 (-) |
| G261186 | NA | non-coding | downstream | 122743 | 3361710 ~ 3361917 (-) |
| G261183 | NA | non-coding | downstream | 132482 | 3351948 ~ 3352178 (-) |
| G261226 | NA | non-coding | upstream | 3328 | 3490563 ~ 3490780 (-) |
| G261208 | NA | non-coding | upstream | 14681 | 3501916 ~ 3555072 (-) |
| G261204 | NA | non-coding | upstream | 88678 | 3575913 ~ 3577974 (-) |
| G261239 | NA | non-coding | upstream | 128255 | 3615490 ~ 3615915 (-) |
| G261248 | NA | non-coding | upstream | 167924 | 3655159 ~ 3655391 (-) |
| CI01000062_00000216_00015634 | EPRS | other | downstream | 3468948 | 216 ~ 15712 (-) |
| G261400 | NA | other | upstream | 458200 | 3945435 ~ 3957385 (-) |
