Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000063_00808299_00809636 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000063 |
| NCBI id | null |
| chromosome length | 7808773 |
| location | 808060 ~ 809636 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Interferon-induced protein with tetratricopeptide repeats 5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000063_00808299_00809636.mRNA | True | 1577 | mRNA | 0.42 | 1 | 808060 | 809636 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000063_00805911_00806593 | NA | coding | downstream | 1428 | 805911 ~ 806632 (-) |
| CI01000063_00792983_00795702 | NA | coding | downstream | 8846 | 792436 ~ 799214 (-) |
| CI01000063_00732118_00733108 | NA | coding | downstream | 74055 | 731590 ~ 734005 (-) |
| CI01000063_00715092_00717330 | HTR7 | coding | downstream | 90252 | 713569 ~ 717808 (-) |
| CI01000063_00667915_00668974 | RPP30 | coding | downstream | 139086 | 667839 ~ 668974 (-) |
| CI01000063_00846790_00858096 | STAMBPL1 | coding | upstream | 36986 | 846622 ~ 859378 (-) |
| CI01000063_00864936_00881531 | LIPA, LIPF | coding | upstream | 54683 | 864319 ~ 881531 (-) |
| CI01000063_00985283_00999270 | PTENB, PTEN | coding | upstream | 174885 | 984521 ~ 999270 (-) |
| CI01000063_01015926_01020021 | PAPSS2A, PAPSS2B, PAPSS2, PAPS2 | coding | upstream | 206290 | 1015926 ~ 1020021 (-) |
| CI01000063_01023917_01026650 | MINPP1B | coding | upstream | 214017 | 1023653 ~ 1027279 (-) |
| G262854 | NA | non-coding | downstream | 97497 | 710089 ~ 710563 (-) |
| G262853 | NA | non-coding | downstream | 98448 | 709256 ~ 709612 (-) |
| G262849 | NA | non-coding | downstream | 112566 | 695102 ~ 695494 (-) |
| G262844 | NA | non-coding | downstream | 121709 | 685944 ~ 686351 (-) |
| G262845 | NA | non-coding | downstream | 134091 | 673440 ~ 673969 (-) |
| G262913 | NA | non-coding | upstream | 15573 | 825209 ~ 825433 (-) |
| G262922 | NA | non-coding | upstream | 24423 | 834059 ~ 834345 (-) |
| G262862 | NA | non-coding | upstream | 29815 | 839451 ~ 843108 (-) |
| G262925 | NA | non-coding | upstream | 63908 | 873544 ~ 876285 (-) |
| G262959 | NA | non-coding | upstream | 135511 | 945147 ~ 945562 (-) |
| CI01000063_01669384_01670016 | HBAE1 | other | upstream | 859775 | 1669317 ~ 1672019 (-) |
| CI01000063_02177769_02178239 | NA | other | upstream | 1366803 | 2177747 ~ 2178395 (-) |
| CI01000063_02326799_02327290 | CBY1 | other | upstream | 1515476 | 2326741 ~ 2327309 (-) |
| CI01000063_02725759_02726399 | NA | other | upstream | 1916123 | 2725759 ~ 2726535 (-) |
| G265567 | NA | other | upstream | 4352858 | 5183279 ~ 5183287 (-) |
