CI01000063_01200458_01207989


Basic Information

Item Value
gene id CI01000063_01200458_01207989
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1200388 ~ 1207989 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_01200458_01207989.mRNA
GAGTGGTGTTAATGGAGATTTCAGAAGTGCACAAGAAGGTCCAACTGGAGCTGGAGGAGTCTTTCATGAGGTTCCACAGAGAGCTCATCACTGAACTGGAGAAGAAAACTGATATGGATATCAAGTACATGAATGCCACATTCAAAAGATACCAGTCGGAACACAAATTGAAGCAAGACTTCTTAGACAAATCACAGGCTGACCTGAAGAAACTGCGCAGAAAAAGTCAAGGAAAACATTCGTCCAAATATGAGATCAAAGAAAATGAGTGTATGGAGACCATCTCATCCCGGCAGACAGACATGCAGAAGTTTATTGCAGAAGGATGTAAGGAAGCTCTGTTGGAAGAGAAAAGGAGATTCTGTTTCCTAGTGGATAAACATTGTGCCTTCTCCTATCAGCTAGCAGCCTTCCATGACAAGGCCAAGGAGATACTGACCGTCAAACTGCCCAGCTGGCAAGATAAGTGTACCGATGCCACCAGGGTGCCAGACACAGTGATAACCATGATTGAAAATCTGCGGACAATGTCAGTCATACCCGAGTCCTCGCCTACATTGGAGCACAGTGACCGGACCAATTCTGGTTCGATTGTTCCGCCCCCAGCCCCATCACTCAAAGCCCACACGAGTCCACTGGCCGGCATGTTCTCCCAGGACATTCCTAAAAGCACCATCTCATCAGAGCACTACTCAGGCAAGCTTACGGTTCCCTCACACTTTGATCTAATCAGACTTCATCACTTCTGCTCTCAAAAATCAAGCGCACTAGTCTTTGTGTTGATGAGGCAGTCCTTGAAACATCACTATCAAGACAGTCTAGATGAAAATGGCCTGTCTAGGTCTGAATCTGTGTCTAGCGGTATGGATGTGGCCAAGAAGAGCAGGGTGCAAACTATCTTCCCCCACACAGCAGGGAATAACCAGACCCTGCTGAGCTTTGATGATGGAGACATTATTACGCTGCTTATCCAAGAGGAGCGAGATGGATGGCTGTATGGAGAACTAGAACATACTGGACAGCGGGGCTGGTTTCCCTCATCTTATTGCCGGACTTACAATGAGCCAGTAATCGCAAACAGAGTCGAGAGCCCATTGCGTAGCCAGAGTGTGACTGATCTTCCAGAGCAGCCGGAGGAAGACGAGGAGGTGGAGCAACCAGTGCTGCTGCCCCCGCCTGACTACAGTGACTCATCCAGGGACAGACCCATCAAGCCCTCCACCCCCTCTCCACAGAATACGGTAAACAGAGTGCGGTGGCAAATAGTATTGCTAAGTGCAAAGTTAGTTGAATAAGCAGCCATTTTCTGGAAAGAGAGACAGAGGGGAGTATCTGGGTGACTTACCCTTTAGTAGCTGAAATAAA

Function

NR:

description
Baiap2l1a protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_01200458_01207989.mRNA True 1365 mRNA 0.48 9 1200388 1207989

Neighbor

gene id symbol gene type direction distance location
CI01000063_01188049_01192674 TECPR1, TECPR1A coding downstream 7714 1188049 ~ 1192674 (-)
CI01000063_01170694_01187133 TECPR1, TECPR1A coding downstream 13255 1170282 ~ 1187133 (-)
CI01000063_01143887_01144418 PVALB3, PVALB2, PRV2 coding downstream 55448 1143203 ~ 1144940 (-)
CI01000063_01133174_01140538 PVALB, PVALB3, MGC80184, PVALB4 coding downstream 59850 1133012 ~ 1140538 (-)
CI01000063_01115076_01126539 CCZ1 coding downstream 73849 1114647 ~ 1126539 (-)
CI01000063_01216041_01217287 NA coding upstream 7726 1215715 ~ 1217563 (-)
CI01000063_01228002_01232509 NPTX2B, NPTX2 coding upstream 18484 1226473 ~ 1232993 (-)
CI01000063_01329725_01330246 NA coding upstream 121722 1329711 ~ 1330272 (-)
CI01000063_01473401_01482295 NA coding upstream 265412 1473401 ~ 1482295 (-)
CI01000063_01483554_01486900 ATPAF2 coding upstream 275299 1483288 ~ 1486900 (-)
G262997 NA non-coding downstream 44436 1155716 ~ 1155952 (-)
G263004 NA non-coding downstream 45775 1154399 ~ 1154613 (-)
G263002 NA non-coding downstream 47261 1152889 ~ 1153127 (-)
G262999 NA non-coding downstream 50519 1149612 ~ 1149869 (-)
G262990 NA non-coding downstream 102256 1097440 ~ 1098132 (-)
G263029 NA non-coding upstream 73038 1281027 ~ 1281776 (-)
G263021 NA non-coding upstream 102752 1310741 ~ 1329440 (-)
G263071 NA non-coding upstream 128605 1336594 ~ 1336815 (-)
G263081 NA non-coding upstream 165477 1373466 ~ 1373863 (-)
CI01000063_01669384_01670016 HBAE1 other upstream 461422 1669317 ~ 1672019 (-)
CI01000063_02177769_02178239 NA other upstream 968450 2177747 ~ 2178395 (-)
CI01000063_02326799_02327290 CBY1 other upstream 1117123 2326741 ~ 2327309 (-)
CI01000063_02725759_02726399 NA other upstream 1517770 2725759 ~ 2726535 (-)
G265567 NA other upstream 3954505 5183279 ~ 5183287 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_005293 baiap2l1a coding NC_007123.7 CM002896.2 17815725 ~ 17863467 (-)