CI01000063_01669384_01670016 (HBAE1)


Basic Information

Item Value
gene id CI01000063_01669384_01670016
gene name HBAE1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1669317 ~ 1672019 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_01669384_01670016.mRNA
ACTATCAATTCAAACACTATTTGAGAGCCAATAAATGAAATAAATGATTTATAAATCAATTCAGAATAAGAAAATCAGAATAATCAAAAACTGTGCTTCAGTTCCCTGCACAATATGTGCCTTATAAGAAAACAAATGTTCATGTTTATTAATAATAATATTAATAATTTTTCAGATCTTAAAAATAATACCGTTTTCTCGATTGCTAACACGCTATAACTGAGTTGGCACAATTCCCCAAACTATATTCATTCAGTTCTCAAAACAAAGACACATTTCTCAAAACGTTTAAAACATTTTTCACACACATTCCAATTTTCTTAATAGTTTCTGCAAAACTCTAACTAAAAACGCCCTCATTTTACACAGGTTTAACCATGTTATCATTCATAAAACAATCAAAGCACTCACCGGGCTCTCCCAGCTAACTGGGTGCTGAGACCTCTATTGACACTGACGAAGGCAGACATCTCCTGCTTAAACTTAATACAACTATTTTTAGAATGCAGACCTTTTTGAATTTTTATCATTCATAAAACACACAATATAATTAACTCAAGCATCGCATTTTCCTCAAATAGCACACATTTATCAATGAGTAGCAAAACTGATGACACACCAATCAGAATCTCAGAAAAAAGGGCCAGAGGTGATTGTGCTTTAGAAAATACATCCTAACACTGCAGAGCCGAAAGAACCATCTACACGGTTTTTATATTAGGCTACTTACACATACAATATAATTACAGTACACAGTAACAGTACTTTAGATGAGGGAAATGTCTCTATTCTATGTACAGTAAACTGTAGCACATGTTGTACACCCTCAAATTCGCGATTTTCAAATACATTTCGCAGAACTGAGAAATGACTTGCTAAGGGAGGTAGAGAAAGTCTTTTGTCAGAAGACCAAGACACTGCTATAGTAGCACTGTATACTGTAATGTAATCTGGCCAAAGGTGCAGAAGATGCTGAATTTATTTATTTACTGTACAGTAATTGACAGTATAGGCCTACTGTATTGTGTTGAATACCGCATTCATATTCAATTATTTGGTATTTGATTTGGTATTTGAAGTTTTCTTTTCTAGTGCTTTTCATCTACTTTAAAATCACTTTACAGTAATGTAGTGAAAACTCATTGATGAATTTTGCTGTATCTTCACATTGTTTCATTTAGCTACTGCAATAGACATTGATTGCTCTTACTAGCCTATTAACGCAGAAATGTTGTATAGGCTATTTGTTCGGTTTTGTGTGTCATCTGAGGCCATATTTGATTTTGACAAAAGATAATATGTTTTTGACTAAATTATTTGATTTTGAGGTGACAGTTTGAGGTTTGTGCAGGTTGGTAGTTCAGGGATTGTGTTTATAGTTGTGAGAAAATGGCGAATTGTTTCATGAATATTGTGTTAGAAATCGAGAGAAACTGTAATAAACATCGTATTAAAAGTAAAATCAGTGGCGTATATGAGGCCATAATGTACCAAATAAATTAGTACTCAAAATAAACTGCATTGGGCTGTTTATTTAAAAAAATAAAAAAATAAAAAAATAAATAAATCTGTTAAATTAAAAGGGTGTAGCTAACATAACATATATTAGGGGTAGGAAGCATAACGAGTCATATCTCACATACTAAAAACTAAACTAACTTACTAAATAAATAAAATAGGCTAATTATTTAAATTAGGTTGTGGGGTTACTTGTATCGAAGATGCGGACGTGAGGTGATTAGGATCTGACCCTTTTCTGTTTATGGCTGACTCAAGTGCTCACGCATGTACATTATCATCACGTATCACCCCTAAAATGAGGAGGGGAAAATGGGCATCATTTCAATTTTCAGTGCTCACTGGCAGGAGTTCAATCTGACACGCAATTAGGCTGTATCTTGGGTGTGCCCACTCAACTACAAACGTTTAAAAAGAGGACCAACGTTTAGGTGGGTAAGTCATTTGACCATAGCACGTCTATTCATTCCAGACATCGATTCAAAATGAGTCTCTCTGCTAAGGACAAAGCCACTGTGAAGGCCCTCTGGGCAAAGATCTCCCCAAAGGCTGAGGACATCGGTAATGAGGCGTTGTCCAGAATGCTTTTGGTCTACCCTCAGACCAAGACCTACTTCTCTCACTGGAGCGACCTGACCCCCGGCTCTGCTCCTGTGAGGAAGCATGGAAAGAAGGTCATCGGTGGACTCGGTTTGGCTATTGAAAAGATCGACGACCTTTTCGGCGGTCTGCTCACTCTTAGCGAGCTGCATGCCTTTCAGCTGAGAGTCGATCCTGCTAACTTCAAGATCCTGTCCCACAACATTCTTGTGGTGTTGTCCATGCTCTTCCCTGATGACTTCACACCTGAAGCCCACCTGGCCATGGACAAGTTCCTTGCAGGAGTGGCCCTGGCTTTGTCTGACAAATATCGTTAACCTGTTTGATATTTGTTAAGCAGTTTGAATGTTGTTTTGTCGATTTGGTCAACAACATGTCAATAAA
>TU298670
GTTTAGGTGGGTAAGTCATTTGACCATAGCACGTCTATTCATTCCAGACATCGATTCAAAATGAGTCTCTCTGCTAAGGACAAAGCCACTGTGAAGGCCCTCTGGGCAAAGATCTCCCCAAAGGCTGAGGACATCGGTAATGAGGCGTTGTCCAGAATGCTTTTGGTCTACCCTCAGACCAAGACCTACTTCTCTCACTGGAGCGACCTGACCCCCGGCTCTGCTCCTGTGAGGAAGCATGGAAAGAAGGTCATCGGTGGACTCGGTTTGGCTATTGAAAAGATCGACGACCTTTTCGGCGGTCTGCTCACTCTTAGCGAGCTGCATGCCTTTCAGCTGAGAGTCGATCCTGCTAACTTCAAGATCCTGTCCCACAACATTCTTGTGGTGTTGTCCATGCTCTTCCCTGATGACTTCACACCTGAAGCCCACCTGGCCATGGACAAGTTCCTTGCAGGAGTGGCC

Function

NR:

description
hemoglobin alpha chain, Hb 2=minor component

GO: NA

KEGG:

id description
K13826 HBZ; hemoglobin subunit zeta

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_01669384_01670016.mRNA False 2502 mRNA 0.37 3 1669317 1672019
TU298670 True 465 TUCP 0.52 3 1669411 1670076

Neighbor

gene id symbol gene type direction distance location
CI01000063_01603848_01622589 NA coding downstream 46531 1603474 ~ 1622786 (-)
CI01000063_01557732_01560541 ZDHHC4 coding downstream 108776 1557653 ~ 1560541 (-)
CI01000063_01554604_01555607 PGP coding downstream 113710 1553980 ~ 1555607 (-)
CI01000063_01548731_01553329 BRICD5 coding downstream 115988 1548447 ~ 1553329 (-)
CI01000063_01541176_01541412 NA coding downstream 126746 1541086 ~ 1542571 (-)
CI01000063_01682341_01683245 NA coding upstream 10260 1682279 ~ 1683245 (-)
CI01000063_01802070_01805063 FOXJ1B coding upstream 129683 1801702 ~ 1805475 (-)
CI01000063_01809470_01817028 MGRN1A coding upstream 137376 1809395 ~ 1817028 (-)
CI01000063_01856270_01877031 MKL2A, MKL2 coding upstream 184226 1856245 ~ 1877095 (-)
CI01000063_01890725_01899483 ERCC4 coding upstream 218373 1890392 ~ 1899546 (-)
G263279 NA non-coding downstream 1473 1666949 ~ 1667844 (-)
G263278 NA non-coding downstream 3518 1665530 ~ 1665799 (-)
G263277 NA non-coding downstream 4239 1664634 ~ 1665078 (-)
G263275 NA non-coding downstream 9347 1659557 ~ 1659970 (-)
G263274 NA non-coding downstream 11358 1657540 ~ 1657959 (-)
G263283 NA non-coding upstream 15280 1687299 ~ 1687525 (-)
G263286 NA non-coding upstream 18739 1690758 ~ 1691170 (-)
G263287 NA non-coding upstream 19748 1691767 ~ 1692242 (-)
G263284 NA non-coding upstream 23535 1695554 ~ 1695729 (-)
G263285 NA non-coding upstream 25751 1697770 ~ 1698235 (-)
CI01000063_02177769_02178239 NA other upstream 504420 2177747 ~ 2178395 (-)
CI01000063_02326799_02327290 CBY1 other upstream 653093 2326741 ~ 2327309 (-)
CI01000063_02725759_02726399 NA other upstream 1053740 2725759 ~ 2726535 (-)
G265567 NA other upstream 3490475 5183279 ~ 5183287 (-)
CI01000063_05189361_05189645 CRIPT other upstream 3516384 5188403 ~ 5189645 (-)

Expression


Co-expression Network