CI01000063_01692878_01697954


Basic Information

Item Value
gene id CI01000063_01692878_01697954
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1692394 ~ 1698078 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_01692878_01697954.mRNA
GTATATGTACACATGCTCTTATCCGCATTCACCAGACTGTCTAAAATGTTGATGAACGACCTCAGCAATAAATACTGTAAGTCACCAGGGATCTGGAACGTCTCCCCTGAACTATATGTCAATGTATAGTTAGAGACAAGTAGTGGATTTACTGTCTGCACTACTGTTTAGATAAAAACATTAACAGCAGACCTGTCTCTCTCTCTCCACCCGAAAAGAAACAGAAAGAGCTCCTGTTTCTGGCTGTTCTTGTCTGTTAATGGTCAGTGATTTAAAAGAAACACTCCTACTTTTGCTTTCCGTTGCAAATGAGTAATGGAATAATTGAGTGACTCACATTTTACCAAAAGAAACCAATACATGGTTTCTTTTTATATAGCTGTTATACAAAGCTATAGCTACATTGTTGGAAACAAGCAGGTCTCACAGTCAGGTTCTCTGAGGGAACATGGACATGTCATCAGGTGGAGGACTACTGTAAACTATGGTACTCCCTTCTGGCTGCCATAAACTAGAAGGTCAGAGGGAAACACAAGAGAGCACAAGTTCTCCTGTGAACAGCTGCCAGCTGTGCTTCCTGCTCTGGGCCTCAGCAGGGGAACTGGAACCTTTGAAGTGGTCACGGTGTGTAGGATTACACAGTCCACCCAAAGGAATAACAATGTCTGAGGAAACTAGAAAATCTGGGATCTTACACACAAAGGCTCTTGCTGTTATGATTGATCTGATGATGAAGATGAAAGGAGCAAGAGCAGAAAGCAAAAACAGCAAAGTATTCCCTGGCAGTTCAAATGTCGGTCACCGGGGGGACATTATAATTCCTGTTTCTCAACACTGGAAAAACGTGGATACTGCAGGATTTCTTAGCAAACCATTTGTGCTGTACAGTTGTGTTCTGGACTCAGCGTTGAATTGTTACACTGGAGAAATGGATGTGTCAAGTCTTTTCAAAGGGGAAAAAGAAATGGAGGTTAAGAAGTAAAAAGGGGCCACCAAAACAACACCAGAATCTGAATGCATCCGTCAAATAGAAATATTTGTGTCAAATGCCAACACCAGGCTAAAAAGAATACAAACTGAATTTTTGAAATACTTTGTGTATGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_01692878_01697954.mRNA True 1106 mRNA 0.41 4 1692394 1698078

Neighbor

gene id symbol gene type direction distance location
CI01000063_01675750_01678399 HBBE3 coding upstream 13936 1675501 ~ 1678458 (+)
CI01000063_01672649_01673337 HBBE2 coding upstream 19009 1672574 ~ 1673385 (+)
CI01000063_01662111_01665744 AQP8A.2, AQP8, AQP8A.1 coding upstream 26650 1662111 ~ 1665744 (+)
CI01000063_01658882_01660951 AQP8A.1 coding upstream 31252 1658882 ~ 1661142 (+)
CI01000063_01643090_01644021 NA coding upstream 47957 1642653 ~ 1644437 (+)
CI01000063_01739754_01764028 RHBDF1B, RHBDF1, RHBDF1A coding downstream 41166 1739244 ~ 1764772 (+)
CI01000063_01784971_01788682 NA coding downstream 86893 1784971 ~ 1788898 (+)
CI01000063_01824468_01849446 NA coding downstream 124776 1822854 ~ 1849454 (+)
CI01000063_01950136_01991996 SHISA9A coding downstream 250096 1948174 ~ 1992128 (+)
CI01000063_02207083_02208978 MAFF, MAFFL coding downstream 509005 2207083 ~ 2209144 (+)
G262104 NA non-coding upstream 6030 1682219 ~ 1686364 (+)
G262101 NA non-coding upstream 36345 1655202 ~ 1656049 (+)
CI01000063_01533946_01534527 MSRB1B non-coding upstream 157019 1533853 ~ 1535375 (+)
G262266 NA non-coding upstream 182766 1509279 ~ 1509628 (+)
G262211 NA non-coding upstream 493557 1196368 ~ 1198837 (+)
G262314 NA non-coding downstream 39720 1737798 ~ 1738321 (+)
G262333 NA non-coding downstream 107886 1805964 ~ 1806185 (+)
G262122 NA non-coding downstream 113430 1811508 ~ 1813486 (+)
G262098 NA non-coding downstream 152278 1850356 ~ 1854092 (+)
G262511 NA non-coding downstream 302784 2000862 ~ 2001064 (+)
G262194 NA other upstream 547387 1139352 ~ 1145007 (+)
G262060 NA other upstream 981840 710110 ~ 710554 (+)
G261984 NA other upstream 1025012 665800 ~ 667382 (+)
CI01000063_00533801_00557577 MPP3B other upstream 1134060 533801 ~ 558334 (+)
G261700 NA other upstream 1417944 252412 ~ 274450 (+)
G262423 NA other downstream 543330 2241408 ~ 2242965 (+)
G262436 NA other downstream 1015537 2713615 ~ 2714517 (+)
G265391 NA other downstream 4215705 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 4637200 6335618 ~ 6338283 (+)

Expression


Co-expression Network