CI01000063_01856270_01877031 (MKL2A, MKL2)


Basic Information

Item Value
gene id CI01000063_01856270_01877031
gene name MKL2A, MKL2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1856245 ~ 1877095 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_01856270_01877031.mRNA
AGCTTCCTGTGACTGCATCTTCTGCTGATCTCCAGCGAGACCCTTGACTCCTCGCTGAGGAGACATGGAGGACCAGGGGGATGCTGGGATTGAGGGTTTGTTGGCACCCAGCCCACAAAGTGAGGCTGTAATCCACGAGATGGGTGAACTAACCCTGCACCCCAACCAGAGGCTGCCCCCTCTCAACGAGCGCAAAAATGTTCTCCAGCTGAGACTACAGCAGAGACGCACCCGCGAGCAGCTCGTTGATCAGGGCATCATGCCACCCCTGAAGAGCCCTGCAGCGTTTCACGAACAGATCCGCAGCCTTGAAAGAGCCAGGACTGAAAATTTCCTAAAGCACAAAATACGCAGCCGCCCAGAAAGGGCCGAATTGGTCCGCATGCACATCTTACAAGAGACTGTGGCGGAGCCTTCTCTGCAGGCCACCCAGCTAAAACTGAAGAGAGCTCGATTGGCTGATGACTTAAATGAAAAGATCGCTCAACGCCCCGGCCCCATGGAGCTGGTGGAGAAGAACATCCTACCTGTGGACTCCAGCGTCAAGGAAGCCATCATTGATGGTCAGATGCAGTACCCCAGAATTCTAGAGGAACCAATAGATGAGGACAGTGGAGATGCGTTTTCACCTGAGCAGCCAGGCAGTCAGGAGTCCCAGGGATCTGCAGCCTCACCTGGGGAGGTCCGGACCATAGAGGAGTTCTCACCAGTGCCCAATAACTTGTTACAGCACTTTCCTACAATCACCACCACTTCGACAGATTTCCTCAAGCCTTTTTCCACCAGTGAGCAATCAGTTAGTCCTCCAGCACCCATGCCACAGCTAGTCACCGTAGCCCCTGTGAAGTCTGGGCCCACACTTGTAAAGCAGAGTCAGCCTAAGCTACCTGGGGACAAGAGCCGTAGTAAGAAGAGCAAGGAGGCCAAGCCACGTGTGAAAAAGTTGAAATATCATCAGTACATTCCCCCAGACCAGAAACAAGAACCCAACCAAGCCCCGATGGACTCTTCATATGCTCGTTTACTACAACAACAGCAGCTATTTTTGCAGCTACAGATCCTGAGCCAACAGCAACAGCAGCACTACAACTACCAGACCATCCTTCCTGCACCTCTCAAGCCTGTGATAGAGGGCCAAAACAGCAGTGCCACAGTTGCTATTAACAGCACCAGCAGCCTTCCTGCCTCAATTGTGGTGTCTCTGCCCACAGCAACACCTGTGCGGCCCAATAGCACCCTTTCCAACCGTAAGGCTGGCACACTACCAGCCAACTTGGAGGAGATGAAGGTGGCAGAGCTGAAAATGGAATTAAAGTTACGTGGTCTTCCAGTGTCAGGAACAAAAACAGACCTTATTGAACGACTTAAGCCTTTCCAAGAAAACCCTGTCACTACTGCACCCAACAACTCCACAGGACCTAACACACAGCCCTGCAGCACACCTATGGAGGTGTCCAGCACCACTACAAGCCTCTCCCCCATCCAGCAGCCCACTGAAAATATGAGCTCCACTCCGCCTGTGTCTCCTGGTTCTTTAGAGCTTCACAACAGAGAAGAAACATCCGTGCAGGGACAGGCAGAGGCCCAAAAAAACAGTTTAGTAAAGGCAGCTCATGTTCCCGAGGAGCAGGACCGGAGACTACATGAAAAGGAGCGACAAATCGAGGAACTGCTGCGTAAACTGGAGCAGGAGCAGAAGCTGGTGGAGGAACTGAAGATGCAGCTGGAGGTGGAGAAAAGGAGTGGACAAGTCATTCCACCTGCTGAAAATTTTTCCAGTCCAGCCACCATGTTGACATCTGTCAAAACAGAAAACACTGTCCCTTCCAACTGCACACTGAGTTCACACACTACACCAACGCTGGTGAAGCTCGAGGAAGCCCACCCCAGCCAGGTGACAGCTACCCCTCTCCGTCAGTTCATTATCAGCCACCAAGGGGTGCCACAGGTCATAGGGCAGCCCCAGACTCTGTTGACCACTCCGCATGGTGGCACTCAGATCCTTCTTCCAATGCCCTTGGCAAATAATACCACTACCATCCAGCTGCCCAACACTAATGTCAAACTACAGCCGGTCTTGCAGGCTCTTTCTCCATCAGGCACAGGTCTAATTCAGACCCCCCAGCTACAGCCCACCAAAGCAGAGAGTCCCACATCACAACAGCTGCTCAGTCACAACCACATAGTTCAGACTCTGCCTGTGGGCACCACCGAGAGGTCAGGTTTCCAGCATGGTACCAGTGAGAACCCAGCAGGCCTGGAGATACCTCAGTGCTTCCTCAGCAGCTCCCCAGAGAACAGGATCTCACCTCAGACGTCCCCCATCTCATCATCCCTTATCAATGGGCCATTAAACAAGGCCTTCATCCAGCAGTCCCCAGTTTTCAACCAGACGCCCAAGAACAGAGAGCCGCCCCGCTATGAGGAGGCCGTCAAACAGACCCGCAGCCTACAGAATCCCGCTATCTCAGAGATTCCCACAGCGACAAGTCAACAGATGGATGATCTCTTTGACATTTTAATAGAAAGTGGAGAGATTACTCCCTTTAGTCAACAGGACCCATCTGTGCCTAAGATGATGCCCGTCACGGCCAGCATCACCACCCTGCCTGTCAACACCGCCCTGTCCCGACCGCCCGCCCAGGTGCAGATGGCACCCCCTCCGGCGCTCATTATGGAGCCTATGCCTAGCCTGGCCTCCCTGGACTCCGATAACCAGTTGGAGGCTTTGCTGGAGGGCACGCTGGTTGGGGACGCAGAGCCGGAGCAGAGGACTTTGGGCCTGTTAGAGGAGCTGCAAAACCAGATGCTGGAGCAGCCAAACTCCCCAATGGACACTTGTGAGCTGAGTTTCACTGACCCACCTGCGCCTTCCTCCTCCACCCTGTCCTTTAGTCTCCAAGACACCGGCCTGGATAACATGGAGTGGCTGGACCTCACTATGCCCGGGCCTATAGGTGGACTCAACCCGCTGGGCATGACCTCTGAATTCCTGGACACTCATGACCTGCAGCTGCACTGGGAGTGAGAGGAATCACTTCAACACAAATAAA

Function

GO:      GO:0001105, GO:0005634, GO:0051145

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_01856270_01877031.mRNA True 3053 mRNA 0.54 15 1856245 1877095

Neighbor

gene id symbol gene type direction distance location
CI01000063_01809470_01817028 MGRN1A coding downstream 39217 1809395 ~ 1817028 (-)
CI01000063_01802070_01805063 FOXJ1B coding downstream 50770 1801702 ~ 1805475 (-)
CI01000063_01682341_01683245 NA coding downstream 173000 1682279 ~ 1683245 (-)
CI01000063_01669384_01670016 HBAE1 coding downstream 184226 1669317 ~ 1672019 (-)
CI01000063_01603848_01622589 NA coding downstream 233459 1603474 ~ 1622786 (-)
CI01000063_01890725_01899483 ERCC4 coding upstream 13297 1890392 ~ 1899546 (-)
CI01000063_01915989_01944590 CPPED1 coding upstream 38328 1915423 ~ 1944590 (-)
CI01000063_02032344_02033792 NA coding upstream 154433 2031528 ~ 2033999 (-)
CI01000063_02041246_02172429 SNX29 coding upstream 164151 2041246 ~ 2172429 (-)
CI01000063_02174216_02175916 TNFRSF17 coding upstream 296818 2173913 ~ 2176162 (-)
G263256 NA non-coding downstream 859 1855014 ~ 1855386 (-)
G263218 NA non-coding downstream 2123 1849945 ~ 1854122 (-)
G263345 NA non-coding downstream 12710 1843298 ~ 1843535 (-)
G263340 NA non-coding downstream 16642 1839291 ~ 1839603 (-)
G263339 NA non-coding downstream 17380 1838660 ~ 1838865 (-)
G263350 NA non-coding upstream 24234 1901329 ~ 1901541 (-)
G263356 NA non-coding upstream 33053 1910148 ~ 1910370 (-)
G263260 NA non-coding upstream 72752 1949847 ~ 1988854 (-)
G263394 NA non-coding upstream 118671 1995766 ~ 1996104 (-)
G263405 NA non-coding upstream 143268 2020363 ~ 2020602 (-)
CI01000063_02177769_02178239 NA other upstream 299344 2177747 ~ 2178395 (-)
CI01000063_02326799_02327290 CBY1 other upstream 448017 2326741 ~ 2327309 (-)
CI01000063_02725759_02726399 NA other upstream 848664 2725759 ~ 2726535 (-)
G265567 NA other upstream 3285399 5183279 ~ 5183287 (-)
CI01000063_05189361_05189645 CRIPT other upstream 3311308 5188403 ~ 5189645 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004673 mrtfba coding NC_007123.7 CM002896.2 19976400 ~ 20045101 (+)
bowfin (Amia calva) AMCG00018355 NA coding CM030135.1 CM030135.1 9162486 ~ 9187759 (+)