CI01000063_02317828_02320348


Basic Information

Item Value
gene id CI01000063_02317828_02320348
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 2317361 ~ 2320348 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_02317828_02320348.mRNA
GGCTTTCATCGTCACAGAGTGTTTCCACGATGCCAAGAGGAGGAGGCGAATGAAGGTGCTGAACGTGGAAGTTCATCAGAATCTGAAGAGGAGAGCAGCAGTGACGATGAACAACCTAAAAGGAAAGGTGTAGAAGGACTTATTGAAATCGAGAACCCGAACAGGACCGCCCATAAAAGCAAGAAGGTTGTGGAAATAGATGTCAACGCACCTAAAGAGCTCTCACGTCGAGAAAGGGAGGAGATTGAGAAGCAGAAGGCTAAGGAGCGATACATGAAGCTGCATCTAGAAGGGAAGACGGACCAGGCCAGGGCAGACCTTGCCAGGTTGGCCATTATCAAAAAGCAGAGGGAGGATGCAGCAAGAAAGCGAGAAGAGCTAAGGAAAGGTGAGCTGGTATCATTGCGTCTTCTGATGCAAGATCAATGAATGACAACCTATATAATGGATGAAAGAAATTATATAGTTTCCTGTTTAGTTGTGTTGAGAGATGCCTAAACCAGGGCCTATGAGACAAAATTAGCCCGTCATGACATATGATAATACCTGCCATGCCATATCAAAAAAACATGCTATTGAAGCATGCCTTTATTTTATCATTTTTTTCTTTTTTTAACGGAAAAGACCCCTTAACCATTCCACTGTACCACCTGTTGTACAAATACCATTCAAAAAGAGACCTTAGGAATGCTAAGGGGTTAAACTTTTTTTGCTTTATTTTTGTATTGAAATCAAGGTATATTTTAATATAATATACAACCCCAATTCCAGAAAAGTTTTGATAGCGATCATAAAGACATTTTCTAAAATGTAAAGAATCTGTGAATTTGTTCATTCTTTTTAAACTTAATTTAACTGACAAAAATATAAAAAAGTTGTGACAGAGGCAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_02317828_02320348.mRNA True 896 mRNA 0.39 4 2317361 2320348

Neighbor

gene id symbol gene type direction distance location
CI01000063_02293142_02305535 SH3BP1 coding downstream 11826 2292193 ~ 2305535 (-)
CI01000063_02234891_02253083 NA coding downstream 64278 2233613 ~ 2253083 (-)
CI01000063_02225053_02232182 CSNK1E coding downstream 85179 2224887 ~ 2232182 (-)
CI01000063_02212324_02222103 TMEM184B, TMEM184B.L, TMEM184BA coding downstream 93695 2212222 ~ 2223666 (-)
CI01000063_02195608_02203412 DMC1 coding downstream 113206 2195579 ~ 2204155 (-)
CI01000063_02321620_02324262 NA coding upstream 1196 2321544 ~ 2324565 (-)
CI01000063_02326799_02327290 CBY1 coding upstream 6393 2326741 ~ 2327309 (-)
CI01000063_02357993_02360597 PHF5A, BRAFLDRAFT_57503 coding upstream 37578 2357926 ~ 2360597 (-)
CI01000063_02404812_02415053 KCTD17, KCD17 coding upstream 83794 2404142 ~ 2415053 (-)
CI01000063_02416343_02425379 NA coding upstream 95925 2416273 ~ 2425636 (-)
G263405 NA non-coding downstream 296759 2020363 ~ 2020602 (-)
G263394 NA non-coding downstream 321257 1995766 ~ 1996104 (-)
G263260 NA non-coding downstream 328507 1949847 ~ 1988854 (-)
G263356 NA non-coding downstream 406991 1910148 ~ 1910370 (-)
G263350 NA non-coding downstream 415820 1901329 ~ 1901541 (-)
G263201 NA non-coding upstream 32834 2353182 ~ 2356169 (-)
G263207 NA non-coding upstream 46673 2367021 ~ 2369202 (-)
G263430 NA non-coding upstream 60064 2380412 ~ 2381248 (-)
G263431 NA non-coding upstream 60998 2381346 ~ 2383423 (-)
CI01000063_02177769_02178239 NA other downstream 139025 2177747 ~ 2178395 (-)
CI01000063_01669384_01670016 HBAE1 other downstream 647285 1669317 ~ 1672019 (-)
CI01000063_02725759_02726399 NA other upstream 405411 2725759 ~ 2726535 (-)
G265567 NA other upstream 2842146 5183279 ~ 5183287 (-)
CI01000063_05189361_05189645 CRIPT other upstream 2868055 5188403 ~ 5189645 (-)
CI01000063_05616519_05617045 NA other upstream 3226353 5615806 ~ 5617112 (-)

Expression


Co-expression Network