CI01000063_02321620_02324262


Basic Information

Item Value
gene id CI01000063_02321620_02324262
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 2321544 ~ 2324565 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_02321620_02324262.mRNA
ATTACACATAACACGCTGCTGTATGGTACACATTGGGTGAAAAGTGAGTGTCAGTCACTTAATGAGCAAGTCGACTTATGACTGTACTTCCTGGGGGTGTAGGGAAATGTGGCTTGTGCTCGTAAACTAACTTCCTCTGTATAATGTGGGGTTGAAAAGCAGCACATGTTCAGTAGTGCATAGAAACTGTTCACAGATATTTACTGCTTCGTTCTGAAAAAGTGTTTTGATCCTATAATTCAATCCAGATAATATAAGTATATTGAAAAGGTTTTGTCTTCTCTTTTGGAGGCCTGAGCAACTATGGGAATTACTGTAGAGGTGAGAGAGACAGAAGGTGCCCCAGATGGCGGCTGGGGCTGGATCGTTCTGCTGGGAGGTTTTGTCATCACTGGCTTCTCGTATGCCTTCCCAAAAGCTATAAGTGTTTATTTTAAAGAACTGATGCAAGACTTTGGCTGTGGATACAGAGACACAGCCTGGATTTCTTCTATATTATTAGCAATGCTCTATGGTTCAGGTCTTGGACTGGCTTTGAACTTCCAACCATCACTGATTATGCTGGGGACTTATTTTGACAAACGCAGACCACTTGCCAATGGACTGGCGGCAGCTGGAAGTCCTGTATTTCTGTCTGTTCTTTCTCCATTAGGACAAGAGCTGCTCAACCGGTATGGATGGAGAGGAGGCTTTCTCATTACCGGTGGTCTTCTGCTCAACTGTTGCACCTGTGCAGCTGTAATGAGACCCCTGCAACGTAAAAAAAGGACAGCGATAGCCTGTTCCCTAGAGCTCAAGGAAATGCTGCCTCCTGAGGCTGGACAAGAGAATATCATTTGTGAAAACAATAATGATAAAAAGCCCACTAAAAAGAAGCTTTTGGACTTCAGTGTACTTTGTAACAGAGGGCTTATTATTTATATCATTGCAAAATTTATAGTTGTCCTCGGCCTATTTGTTCCAACCATTCTCTTAGTCAACTACGCTAAGGACCAAGGAGTGCCTGACCAGGATGCTGCATTTTTGTTGTCTATTATAGGATTTATTGACATCTTTGCTCGTCCCACATGTGGCTTATTGGCCGGTTTAAAATGGATTCGACCCAAGATGCCTTATTTCTTCAGCCTGGCCTTGCTCTTCAATGGCCTAACAGATGTTTGTTCAGCTAAAAGCACAGACTATAAGGGACTTGTTATCTTTTGTGTGTTCTTCGGGCTGTCTTATGGCATGGTGGGTGCTCTACAATTTGAAGTGCTGATGAGTATTGTGGGAACAAGCAGTTTTTCCAGTGCCCTTGGCCTAGTGCTCCTCATTGAGGCAGTGGCTGTGCTGATCGGACCACCCTCTGCTGGTAATTTGGTGGACAAGTACAAGAACTATGAACTGATTTTTTACATGGCTGGAGGAGAGCTGATCATCGCTGGACTATTTCTTGCTCTTGCAACATTCTTTTGTCTTAACCAAAAGAAACACAAAGACTCACAGCAGAAAAATCATGGTGATTGTGGCAATCAATCTTAAAAGATAAACAGTGGAGAGAGCTTAAGAGAGTGAAGTTCACATTCAATTCATTTTTTTAGTTATATGTGTTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_02321620_02324262.mRNA True 1597 mRNA 0.43 3 2321544 2324565

Neighbor

gene id symbol gene type direction distance location
CI01000063_02317828_02320348 NA coding downstream 1196 2317361 ~ 2320348 (-)
CI01000063_02293142_02305535 SH3BP1 coding downstream 16009 2292193 ~ 2305535 (-)
CI01000063_02234891_02253083 NA coding downstream 68461 2233613 ~ 2253083 (-)
CI01000063_02225053_02232182 CSNK1E coding downstream 89362 2224887 ~ 2232182 (-)
CI01000063_02212324_02222103 TMEM184B, TMEM184B.L, TMEM184BA coding downstream 97878 2212222 ~ 2223666 (-)
CI01000063_02326799_02327290 CBY1 coding upstream 2176 2326741 ~ 2327309 (-)
CI01000063_02357993_02360597 PHF5A, BRAFLDRAFT_57503 coding upstream 33361 2357926 ~ 2360597 (-)
CI01000063_02404812_02415053 KCTD17, KCD17 coding upstream 79577 2404142 ~ 2415053 (-)
CI01000063_02416343_02425379 NA coding upstream 91708 2416273 ~ 2425636 (-)
CI01000063_02444203_02454140 L3MBTL2 coding upstream 119584 2444149 ~ 2454281 (-)
G263405 NA non-coding downstream 300942 2020363 ~ 2020602 (-)
G263394 NA non-coding downstream 325440 1995766 ~ 1996104 (-)
G263260 NA non-coding downstream 332690 1949847 ~ 1988854 (-)
G263356 NA non-coding downstream 411174 1910148 ~ 1910370 (-)
G263350 NA non-coding downstream 420003 1901329 ~ 1901541 (-)
G263201 NA non-coding upstream 28617 2353182 ~ 2356169 (-)
G263207 NA non-coding upstream 42456 2367021 ~ 2369202 (-)
G263430 NA non-coding upstream 55847 2380412 ~ 2381248 (-)
G263431 NA non-coding upstream 56781 2381346 ~ 2383423 (-)
CI01000063_02177769_02178239 NA other downstream 143208 2177747 ~ 2178395 (-)
CI01000063_01669384_01670016 HBAE1 other downstream 651468 1669317 ~ 1672019 (-)
CI01000063_02725759_02726399 NA other upstream 401194 2725759 ~ 2726535 (-)
G265567 NA other upstream 2837929 5183279 ~ 5183287 (-)
CI01000063_05189361_05189645 CRIPT other upstream 2863838 5188403 ~ 5189645 (-)
CI01000063_05616519_05617045 NA other upstream 3222136 5615806 ~ 5617112 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004657 slc16a8 coding NC_007123.7 CM002896.2 19191787 ~ 19198771 (+)