CI01000063_02426661_02427701


Basic Information

Item Value
gene id CI01000063_02426661_02427701
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 2426177 ~ 2427701 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_02426661_02427701.mRNA
GTATAAAAATTCAATATGATTTTTCATGTATTTATTTAACTAATGTTGCTGCGCTTGAATGGCTAGTTTGAGTTAATGGGTGAACTAGGAAGCTAACTCTCTGAGCTAGCCTGAGCTGTGTGTATCAGCCATTGTACCAATGAAGCAATGATGATATTACCACGTTAACAGTGTGGGATAACGTGAGCTCAGCATCATCTGTTTTGGGTTTATCGAGATGCCAGGTGCAACAGCTTATTTTAAATTGAACACGTTTTCATCGTCGGTCTTCTATTTTATTTGTATAGTGACAGGCTAGCATATTGAGCTAATGTTACAGTCCTGTTTATGAGTTAAAAAGTGTGGATGTAATTATATGAATGAGTAAATTCATATGCTTGCGAGATCTAGAAGTTGTTTGAACTTTAGTTTCTATGTTGGTGCTATATTTTTGACACCTGTTCATGTTTCAATAACTACCAGTACATAAAGTAAAGGGAACGCAATGGCCTCTGGAGATATTGCTCAGATTACAGAGGCTCTGGCCAAGACTCATGTTGGAGAAGTGGAATTAAGTTATAAGGGACGAGGGCTAAAGTTGGACAATGCTGAATCAGTGAAAGAGATGGTGCAGGAGATTGAACAGTGTCAGGGTTTGCAGTCCCTCAGATTGGAGGGAAACACATTGGGGGTTGAAGCAGCACAGGCCATTTCCAAGGCTCTTGAAGCTAAAAGTGAATTGGAGCAATGTCATTGGAGTGACATGTTCACAGGTCGCCTTCGCTCTGAAATTCCACCTGCTCTGAAATCATTGGGTAATGCTTTGATGACATCAGGGGCCAGACTGACTCAGCTGGACTTGAGCGACAATGCCTTCGGCCCTGATGGTGTAAAGGGAATTGAAAGCCTCCTGAAGAGCTCTGTGTGCTACACCTTACGTGAGCTCAGGCTTAATAATTGTGGGATGGGCATTGGAGGGGGTATGGTCCTTGCTTCTGCATTGACTGAATGCTATAAGCAATCTAGTGCAGCTGGCTCCCCCTTGAAGTTAAAAGTCTTCATAGCTGGACGTAATCGACTGGAGAATAATGGTGCCACTGCACTTGCCAAAGCATTTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_02426661_02427701.mRNA True 1099 mRNA 0.42 5 2426177 2427701

Neighbor

gene id symbol gene type direction distance location
CI01000063_02380854_02399161 NA coding upstream 26598 2380854 ~ 2399579 (+)
CI01000063_02376409_02377664 CSDC2, CSDC2A coding upstream 48487 2376409 ~ 2377690 (+)
CI01000063_02362425_02374879 ACO2 coding upstream 51190 2362425 ~ 2374987 (+)
CI01000063_02350026_02353930 TEFA coding upstream 72065 2350026 ~ 2354112 (+)
CI01000063_02329534_02344024 ZC3H7B coding upstream 81206 2329534 ~ 2344971 (+)
CI01000063_02429298_02443492 CHADLB, CHADL coding downstream 1597 2429298 ~ 2443652 (+)
CI01000063_02454392_02493278 EP300A coding downstream 26641 2454342 ~ 2493654 (+)
CI01000063_02509880_02511162 NA coding downstream 82179 2509880 ~ 2511622 (+)
CI01000063_02523431_02524048 NA coding downstream 95730 2523431 ~ 2524245 (+)
CI01000063_02541728_02577373 SHISA8B coding downstream 113203 2540904 ~ 2578385 (+)
G262442 NA non-coding upstream 46471 2378913 ~ 2379706 (+)
G262651 NA non-coding upstream 98465 2327033 ~ 2327712 (+)
G262352 NA non-coding upstream 107972 2313709 ~ 2318205 (+)
G262439 NA non-coding upstream 122887 2300178 ~ 2303290 (+)
G262625 NA non-coding upstream 178771 2247167 ~ 2247406 (+)
G262671 NA non-coding downstream 73091 2500792 ~ 2563085 (+)
G262443 NA non-coding downstream 162989 2590690 ~ 2592445 (+)
G262422 NA non-coding downstream 192765 2620466 ~ 2623866 (+)
G262726 NA non-coding downstream 200368 2628069 ~ 2628966 (+)
G262728 NA non-coding downstream 205470 2633171 ~ 2633711 (+)
G262423 NA other upstream 183212 2241408 ~ 2242965 (+)
G262194 NA other upstream 1281170 1139352 ~ 1145007 (+)
G262060 NA other upstream 1715623 710110 ~ 710554 (+)
G261984 NA other upstream 1758795 665800 ~ 667382 (+)
CI01000063_00533801_00557577 MPP3B other upstream 1867843 533801 ~ 558334 (+)
G262436 NA other downstream 285914 2713615 ~ 2714517 (+)
G265391 NA other downstream 3486082 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 3907577 6335618 ~ 6338283 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_005308 rangap1b coding NC_007123.7 CM002896.2 19007926 ~ 19028068 (-)