CI01000063_02509880_02511162


Basic Information

Item Value
gene id CI01000063_02509880_02511162
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 2509880 ~ 2511622 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_02509880_02511162.mRNA
ACATTGTTTAGGGCATGCAGGGCGCACAGCTCTCGATGCTGCTTTTCGTGATAAATGGTGGGAGGTTGTGACGAGAACATGGAGTACTCCCCATTCCTGCTGCTATGTCACCACTATCATCTCCACAGCAACCTCTCAGCTGCTTGGGATGAGTGGCAAGGGGAGGGGAGTTTGCTACTGGGATGAAAGCTCTGTGGCTCAACGTGAGCATGCGCAAAACGTCATTGGCTTTCCGCTGGCTTGCGTCACGAGCAGGTTGCATCCCATGGGACTGTCAAACACGCCTCGGTCGCCCACATTAGGAAATTAATAAAAGACTATATCTTTTTGGAAACATTAATTATCATTTTTTTTTCCCCCAATATAAAAATATTTTGGGATTGTGTAGGGTCTGTTCTGTATAAACAGCCCACTAGGTCTGTGCCTTATTGATTAGCAGAAAATAAGATCCAGACATCAACATTTACATCTGTTGTAATTTCAAACATCTGTGGTAAATGAGTAGTCACCCTTCTGTTTGTTTTCATTTAGTGCTAATGAGAAAACAAATGACAATGCCTGATGACTTCATTCCAGATGTACTGGAAGCCCACAAACTAGTAACTGTTTAATAGTTGCATAACAAAATAATAAGTATCAGATATATTTGCATGCCTAGGCTGGGGATGGACGGAATCTGTATTTTTCTTTTGACTTAAAACAAGTTTAACAAAGCTGAGAGAGAACTAAACAAACTAGTTACTGAAATCATAATTAAATTAGCTGAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_02509880_02511162.mRNA True 770 mRNA 0.41 3 2509880 2511622

Neighbor

gene id symbol gene type direction distance location
CI01000063_02454392_02493278 EP300A coding upstream 16226 2454342 ~ 2493654 (+)
CI01000063_02429298_02443492 CHADLB, CHADL coding upstream 66228 2429298 ~ 2443652 (+)
CI01000063_02426661_02427701 NA coding upstream 82179 2426177 ~ 2427701 (+)
CI01000063_02380854_02399161 NA coding upstream 110301 2380854 ~ 2399579 (+)
CI01000063_02376409_02377664 CSDC2, CSDC2A coding upstream 132190 2376409 ~ 2377690 (+)
CI01000063_02523431_02524048 NA coding downstream 11809 2523431 ~ 2524245 (+)
CI01000063_02541728_02577373 SHISA8B coding downstream 29282 2540904 ~ 2578385 (+)
CI01000063_02597775_02598565 NA coding downstream 85687 2597309 ~ 2598598 (+)
CI01000063_02637055_02642906 GNA13, GNA13.S, GNA13A coding downstream 124822 2636444 ~ 2644255 (+)
CI01000063_02647329_02647886 AMZ2 coding downstream 135707 2647329 ~ 2648032 (+)
G262442 NA non-coding upstream 130174 2378913 ~ 2379706 (+)
G262651 NA non-coding upstream 182168 2327033 ~ 2327712 (+)
G262352 NA non-coding upstream 191675 2313709 ~ 2318205 (+)
G262439 NA non-coding upstream 206590 2300178 ~ 2303290 (+)
G262625 NA non-coding upstream 262474 2247167 ~ 2247406 (+)
G262443 NA non-coding downstream 79068 2590690 ~ 2592445 (+)
G262422 NA non-coding downstream 108844 2620466 ~ 2623866 (+)
G262726 NA non-coding downstream 116447 2628069 ~ 2628966 (+)
G262728 NA non-coding downstream 121549 2633171 ~ 2633711 (+)
G262434 NA non-coding downstream 155444 2667066 ~ 2707199 (+)
G262423 NA other upstream 266915 2241408 ~ 2242965 (+)
G262194 NA other upstream 1364873 1139352 ~ 1145007 (+)
G262060 NA other upstream 1799326 710110 ~ 710554 (+)
G261984 NA other upstream 1842498 665800 ~ 667382 (+)
CI01000063_00533801_00557577 MPP3B other upstream 1951546 533801 ~ 558334 (+)
G262436 NA other downstream 201993 2713615 ~ 2714517 (+)
G265391 NA other downstream 3402161 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 3823656 6335618 ~ 6338283 (+)

Expression


Co-expression Network