CI01000063_02647329_02647886 (AMZ2)


Basic Information

Item Value
gene id CI01000063_02647329_02647886
gene name AMZ2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 2647329 ~ 2648032 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_02647329_02647886.mRNA
ATGCAGGTTATTGAGCATCCTGTTGAGAGACTGCATACTGCTCTCCTGTCCACACAGAAAGATTTAATAAAAACATTTCAAAAATTCAGCAGAGCTGAGAAGACGCTTCTAGAAGATGGACTTCTGCCTGGCAATTCACTTTTCAGCCCCATCACCATTCACTCGGACTCAGACTGGATTCCTTCACATCCAGAAGATCCTCAGGACTTTCAGAGTTTTTACATCAACCCATACCGCCGTTCTCCAAAACGTGGACATAAAACCATCTATATTCAAACTATTGGCTCTTTTGGGGAAGGAGCAGTTGTGGCAGAGCAGTATGTTGAATGGCTAAAGGACTACTGTCAGGCCTTCTTTTACGGACTAGTGGTCAAGCTTTTACCACCAGTAACAGTTGCTTCAACAGCCTGTTCATTTCGGGTCAACAACAACACACATAACCTTCAGCTTCATGCTGGTTAGTAATCCTGCAACAGAACACAACCAAAATTTAGTCAGTGAGGCTTTTAGCCACATTTGTGAATAGTTAATCAGCATGAAATCAAAATTGGCACTGAATTTACATTTAATTTATTTACTTTCTTAATGCATTTTTTTTTTTGGTCTTA

Function

symbol description
amz2 Predicted to enable metal ion binding activity and metallopeptidase activity. Predicted to be involved in proteolysis.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_02647329_02647886.mRNA True 608 mRNA 0.40 2 2647329 2648032

Neighbor

gene id symbol gene type direction distance location
CI01000063_02637055_02642906 GNA13, GNA13.S, GNA13A coding upstream 3074 2636444 ~ 2644255 (+)
CI01000063_02597775_02598565 NA coding upstream 48731 2597309 ~ 2598598 (+)
CI01000063_02541728_02577373 SHISA8B coding upstream 68944 2540904 ~ 2578385 (+)
CI01000063_02523431_02524048 NA coding upstream 123084 2523431 ~ 2524245 (+)
CI01000063_02509880_02511162 NA coding upstream 135707 2509880 ~ 2511622 (+)
CI01000063_02654022_02654466 NA coding downstream 5990 2654022 ~ 2654638 (+)
CI01000063_02666157_02672420 ARSG coding downstream 17183 2665215 ~ 2672420 (+)
CI01000063_02683852_02690204 NA coding downstream 35409 2683441 ~ 2690515 (+)
CI01000063_02691683_02695421 STX4 coding downstream 43651 2691683 ~ 2695528 (+)
CI01000063_02697497_02705829 NA coding downstream 49344 2697376 ~ 2705865 (+)
G262728 NA non-coding upstream 13618 2633171 ~ 2633711 (+)
G262726 NA non-coding upstream 18363 2628069 ~ 2628966 (+)
G262422 NA non-coding upstream 23463 2620466 ~ 2623866 (+)
G262443 NA non-coding upstream 54884 2590690 ~ 2592445 (+)
G262671 NA non-coding upstream 84244 2500792 ~ 2563085 (+)
G262434 NA non-coding downstream 19034 2667066 ~ 2707199 (+)
G262413 NA non-coding downstream 70826 2718858 ~ 2719317 (+)
CI01000063_02744075_02750377 ST6GALNAC1.1 non-coding downstream 82659 2744075 ~ 2750586 (+)
G263552 NA non-coding downstream 178778 2826810 ~ 2827031 (+)
G263588 NA non-coding downstream 219490 2867522 ~ 2867784 (+)
G262423 NA other upstream 404364 2241408 ~ 2242965 (+)
G262194 NA other upstream 1502322 1139352 ~ 1145007 (+)
G262060 NA other upstream 1936775 710110 ~ 710554 (+)
G261984 NA other upstream 1979947 665800 ~ 667382 (+)
CI01000063_00533801_00557577 MPP3B other upstream 2088995 533801 ~ 558334 (+)
G262436 NA other downstream 65583 2713615 ~ 2714517 (+)
G265391 NA other downstream 3265751 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 3687246 6335618 ~ 6338283 (+)

Expression


Co-expression Network