CI01000063_04807641_04810737


Basic Information

Item Value
gene id CI01000063_04807641_04810737
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 4807294 ~ 4811188 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_04807641_04810737.mRNA
ATTTATATAGATACTTTGATGACTTGGCCCCACTGTAGCACACCTGGATCCCACTGAAGGTTTTTTAAGCAAAGCAGTAGCCTTATTTTTTTTTAGAAGACCACTAGTTGGGCCTTAGCGACTCCCTTTATTCAGATTTGTATATCTAGAAATTGAAAAAGAGTTGGCCGTAATACAGGCCTTCTCCCTCTCTCAGTGAACAATGAGTAAATTAGCCCAAATGCATAGCAGTCCTGTATGCCATTGGGAGCTCTGTTACACTTTAGGAGCACATCACTAGAAGAGCTGAATCATTTTTTAGTTTTGATTAGTTCTATTGTTAGTTCTAACTTCCTTTACCATTCACAATGAGCTTCTCAATGCGGAACGGCGCACATCTAATCTGGATGGGCTTACTGGTTTGTTGCCTTGTCGACATGGGGGCCAGCATGGAGTTCACCGGCGCAGAAGGCCAGTGGGCCAGGTTTCCTATGTGGAACGCCTGCTGCGAGAGCGAAATGAGTTTCAACATGAAGACCAAAAGCGCTCATGGACTTTTAGTGTACTTTGACGACGAGGGATTCTGTGACTTCTTGGAACTGCTCATCCACAACGGTAGACTCAGTTTGCGGTTCTCCATCTTCTGCGCCGAGCCGGCGACGGTGCTCTCCGACACCGCCGTCAACGACAGCCGCTGGCACGCCGTGACCTTGCGCAGGAATTTCAAAAACACTACGTTAGTTGTGGACGAAGAGATCAAGTGGGTGGAGGTTAAGTCGAAAAGGAGGGACATGACGGTCTTCAGCCATTTATTCTTAGGAGGAATACCTCCTGAACTGCGATCTGTAGCATTACGCCTCACGTCTTCAGCCATCAAAGATCAGGTTCCCTACAAAGGATGGATAACCAATCTGAGGGTGAACGGTTCCGAGCCGCCGCTTATCAATAGCGAGGGAATCAACAGCGACATTTGCGAAGCCGACCACGTTTGCCTGAACGGTGGAGTCTGCAGCATCGTCAACGACGAGCCGATTTGCGACTGCTCCGAAACGGGATTCCAGGGAAAAGACTGCAGTGAAGCCCTTTCACTTCTTTTTTCGTTTCAACATTGCACTAGTTCCTCAAAGGCAGTGCATGCTACATCATGTCTGTTCCTGGCCTCCACTACAGGCCCAGTACATTACATGATTAGATTACCACTGATTTCGAATAGCAGTCGCGTTGTGGTACGGTGTTTGCTGGGCTCTCGGCGAAATGGAGAGTCTAGTGTATTTGATGAGATTATGACAAAAGGGCAGGGCCCGCAGATGCTCGGCAGCTTACTTAAAAGCAAGATGTGCCGCTCTCCAGCCCCTGCGCTGGTAGAAATGCGCATCTTTGCCGGATATATGTGCTGTTTGCTTTCCTCTGTCGTCATGGAAAAATGTGCAGTGCCTTGGGAGCGTGTGTACGTGTTTGCAGATCTCAGGCAGGAAAGGGTGGCAGTTGTGGTAATAACCTTCTTTAGCAAAGCAGGTGTGGGGCTCTCAGCGGGAAAGGCAGTCCGCACTGCAAAGAATAACAGTGCTACGGGTAATGAGATATTTTTGCCCTGCTGGGGTTAGAGAAAGGGCCTTATTTTGTGTTATTATGGTTAATGCTCTTACAAGTCTGAATTGGAAAGCCAAAAGAGTCTACTCTGTATCAGCTTGCAGCCATTGATACCTTATCTTTATGCTCTATTAACTGTATAATGTGCTCCGTCTCCCTGGTTAAAGATGGCTGTAAGGGATCTGCAATTGACGTCCATGCGGTTTCATATGCTAGGAGACTTTGGTTGGAGAATTGGATTGTGTTGGAGGGCTTGTTTACAACAGCGATTAGATTGTTTCACCTCATCTCTTATCTTTTGTGGTGGAGCTAACGTTGTAAGGGCCGGTTCCTGGCTGTACACTGTGTCATTTAATGATGCAGTCATATTTTAAATGTAATTTTTTTTTGCCTCCGCTATTGGATCTATGTAGATGAATGAGGGTGTGTAGTGTAGTGTACGCCTATTAACCTCTTGCTAATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_04807641_04810737.mRNA True 2034 mRNA 0.47 5 4807294 4811188

Neighbor

gene id symbol gene type direction distance location
CI01000063_04670608_04680828 ASB3 coding upstream 126393 4670608 ~ 4680901 (+)
CI01000063_04633004_04663849 PSME4B, PSME4 coding upstream 143279 4632009 ~ 4664015 (+)
CI01000063_04594405_04629754 SVIL coding upstream 176842 4594405 ~ 4630452 (+)
CI01000063_04568412_04568747 NA coding upstream 238084 4568284 ~ 4569210 (+)
CI01000063_04544999_04552162 NA coding upstream 255029 4544042 ~ 4552265 (+)
CI01000063_04878276_04890999 NRXN1, NRXN1A coding downstream 66426 4877614 ~ 4891019 (+)
CI01000063_04896882_04899387 NA coding downstream 84575 4895763 ~ 4899991 (+)
CI01000063_04927483_04988999 NRXN1A, NRXN1 coding downstream 116295 4927483 ~ 4988999 (+)
CI01000063_05034462_05041925 FSHR coding downstream 223274 5034462 ~ 5043319 (+)
CI01000063_05083449_05083858 NA coding downstream 272261 5083449 ~ 5084210 (+)
G264960 NA non-coding upstream 51173 4755714 ~ 4756121 (+)
G264206 NA non-coding upstream 311367 4495716 ~ 4495927 (+)
G264205 NA non-coding upstream 312575 4494504 ~ 4494719 (+)
G264204 NA non-coding upstream 313198 4493790 ~ 4494096 (+)
G264158 NA non-coding upstream 334319 4469864 ~ 4472975 (+)
G264997 NA non-coding downstream 203161 5014349 ~ 5014586 (+)
G265004 NA non-coding downstream 212934 5024122 ~ 5024402 (+)
G265005 NA non-coding downstream 215957 5027145 ~ 5027379 (+)
G264948 NA non-coding downstream 259263 5070451 ~ 5074125 (+)
G264945 NA non-coding downstream 273692 5084880 ~ 5085892 (+)
G262436 NA other upstream 2092777 2713615 ~ 2714517 (+)
G262423 NA other upstream 2564329 2241408 ~ 2242965 (+)
G262194 NA other upstream 3662287 1139352 ~ 1145007 (+)
G262060 NA other upstream 4096740 710110 ~ 710554 (+)
G261984 NA other upstream 4139912 665800 ~ 667382 (+)
G265391 NA other downstream 1102595 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 1524090 6335618 ~ 6338283 (+)

Expression


Co-expression Network