CI01000063_04896882_04899387


Basic Information

Item Value
gene id CI01000063_04896882_04899387
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 4895763 ~ 4899991 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_04896882_04899387.mRNA
GTATAAATGCCTGTTTGTTGGAGTCGCCAGGAAAACAATGAGGGTGATTATGGAACTCGTGAAAGTGTTTTAACATTATTAGAGTGAATGAAAGGCTCGCCACACCTGAGAGCACTGTGTTTTCGTTCTTTATATTAACCACTGTTGTAAAAGCGGTATTTAGACGTAAACCATAAAACAGGAGGGCGGACAGAAACAAGCTTTGAAAGGGTTCACAAATAATTTGTGAGAACTGAATCAGTCACAACCAATAAAATAAATATGAATAGGGCTGAGCTTTCATTCTGTTATATGCCCTTTTGATAGTGATGACTATCCAGTGAATCTGGTACATATTGTCTACTGTTGCTATGGAGACTGCTTTTTGAATCTTTGTATAAGGGTTTGCACTGTCATATCAAGACAGCCCAAAAACAGATGATAATATGAAAGCATATTGATTGCACATATGGGTTTTAATCCCCATTTCCAACAATATGTAAAATGTAAATTATTACTATATACATCCAGTAAAAGTTCTGTACTGCGCAGAGAACTTTATTACTTACGATTCCCTTTATTGATATATAATATAATATAATATAATATAATATAATATAATATATGAAAAGTGCTTTTACCTTAACCAGAAATTATGCAAAAGACTTATCATTATGCCAAGGGCCCACATTTTGTTACGGGCTTCCTTTTTTTTTTTTTTAGAACCAATCTTGTTCATAACTCATACTTTTGCTATTGACATCTACATCAAGCTTATTTGATCATCTGCAGAGCAATTTTCATACTCGACACATACCTACAAATGCAAAACTGACAAATCAATGCTATAGGCGCTGTTCTGACAAATGGTGACAAAGTGTTGTTCTGGAATCATCTTTCACACTTCCAAGCATAAGCGTGAATATACAGTAGCTACATAATTTCAAATTTACTTTGAGGAGACTGAAACCCAGAGATGTTCGTCTACATTGTGTGCTCTGAAAGCAAAGGGGGTTTTATTTACAGAGGAAAGAATGAAGGATAATTTCAATAGCCTTAAAGAGTTTCATTTGCATAGTCCATAATTTGCATATATAATTTCTCATTAAAACTGAATCAAACTTTTTAGAAGTTGCTGAAATGGCATCTAAACATCAAGTTAACATAATTAAATTTGCTCCTCGTGGTTTTGTGACAGGCACCATTTCCGTCAACTCGATCCGTACTCCCTACAACGCTCCCGGTGAGAGTGAGATCCTGGACTTGGACGACATACTCTACCTGGGCGGCCTGCCAGAGGACCGCGCCGGTCTGATCTTCCCCACGGAGGTGTGGACCGCTCTCCTTAACTACGGCTATGTGGGCTGTGTGCGAGATCTGTTCATGGACGGCCAGAGCAAGGACATCCGGCGGATAGCGGAGGCTCAGAGAGCGGTCGGGGTGAAGCCATCCTGTTCTAAGGAACCTCCCAAACAGTGTCTAAGCAACCCCTGCCTTAATAGCGGCACCTGCAGAGAGGGCTGGAACCGATATGTGTGTGACTGCTCAGGGACGGGCTATCTAGGTCGCTCCTGTGAGAGAGAGAGAGCCACTCAAGCATGGATTATGTTTTTGCCTTTTGTCTCCATCCCTAGCAGAATTTTAATTCTGTTGTTTTTCCAGATGAACAAAGCGACCAGCGTTCTCCGCCTCCCTGTCAAAAAGGGAGTCAGCGATAGCTCAAAGTCCACATCCAGTTATGCATTTCCACCCCTCATAGATGCCTCCTTATATTCTGGCAGGCCTACGTGAAGTGGTTTAAGCTATAGTGGCTAATTCTTTAATGGAAGAGCATCTCTTAAGCTTGTTGCTGTTGTCTGGACACTGATATCACCCTGCAGCAAAGATGCTGCTGTGGGAAAATAACAATCAATTACATGCGCATTGTTGAAGCTCTGTGCAGGAATTATGGAAATGATTCAGTCAATTAACCCATCAAAGATGGGTTGCTTTGTCATCGCCCAAGCAAATTTCACCACAAACAGCCATCAGAAAGAGAATGGTGCAGTCTGGTGCAGTTTTATTGGGTGTTGCCGGCTTCCTCCAGATGCACATTTATAAGATTCCAGTCACAGAAAACAGTTCTTTGTGAAAGGCTAAAATGGAGAAATTAGATGAGACACACAGAGAAAGAGACAGGAAGACAAAAAGAGACAGGCGACAGTGTTAATCTTGTCAGCAAAATTACTAATGGAAATGTTTGTTAACAAAGGGTTTTTTAATGTGTAAATGATAATGAAGAAGAGATGACAAAGATGCTTAATGACAATAATTAAGCAATTTTAATTAAAACATGCTTAAAATATGAGGCAAAAATAACTAAGATATTAATGCAGTAAAATGGTTTTAGAAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_04896882_04899387.mRNA True 2374 mRNA 0.40 2 4895763 4899991

Neighbor

gene id symbol gene type direction distance location
CI01000063_04878276_04890999 NRXN1, NRXN1A coding upstream 4744 4877614 ~ 4891019 (+)
CI01000063_04807641_04810737 NA coding upstream 84575 4807294 ~ 4811188 (+)
CI01000063_04670608_04680828 ASB3 coding upstream 214862 4670608 ~ 4680901 (+)
CI01000063_04633004_04663849 PSME4B, PSME4 coding upstream 231748 4632009 ~ 4664015 (+)
CI01000063_04594405_04629754 SVIL coding upstream 265311 4594405 ~ 4630452 (+)
CI01000063_04927483_04988999 NRXN1A, NRXN1 coding downstream 27492 4927483 ~ 4988999 (+)
CI01000063_05034462_05041925 FSHR coding downstream 134471 5034462 ~ 5043319 (+)
CI01000063_05083449_05083858 NA coding downstream 183458 5083449 ~ 5084210 (+)
CI01000063_05108936_05112439 CALM, CALML6, CALM2, CALM3, CALM1 coding downstream 208945 5108936 ~ 5113069 (+)
CI01000063_05183819_05187667 GCH2, GCH1 coding downstream 283628 5183619 ~ 5188349 (+)
G264946 NA non-coding upstream 23201 4758404 ~ 4872562 (+)
G264960 NA non-coding upstream 139642 4755714 ~ 4756121 (+)
G264206 NA non-coding upstream 399836 4495716 ~ 4495927 (+)
G264205 NA non-coding upstream 401044 4494504 ~ 4494719 (+)
G264204 NA non-coding upstream 401667 4493790 ~ 4494096 (+)
G264997 NA non-coding downstream 114358 5014349 ~ 5014586 (+)
G265004 NA non-coding downstream 124131 5024122 ~ 5024402 (+)
G265005 NA non-coding downstream 127154 5027145 ~ 5027379 (+)
G264948 NA non-coding downstream 170460 5070451 ~ 5074125 (+)
G264945 NA non-coding downstream 184889 5084880 ~ 5085892 (+)
G262436 NA other upstream 2181246 2713615 ~ 2714517 (+)
G262423 NA other upstream 2652798 2241408 ~ 2242965 (+)
G262194 NA other upstream 3750756 1139352 ~ 1145007 (+)
G262060 NA other upstream 4185209 710110 ~ 710554 (+)
G261984 NA other upstream 4228381 665800 ~ 667382 (+)
G265391 NA other downstream 1013792 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 1435287 6335618 ~ 6338283 (+)

Expression


Co-expression Network