CI01000063_05616519_05617045


Basic Information

Item Value
gene id CI01000063_05616519_05617045
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5615806 ~ 5617112 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_05616519_05617045.mRNA
AGTTCCTGACTGACATCCGACACGAAACATGGACTTCATCAAGGGAGCAGCAGATGGGAAGGTGGACAAGGTAATCGATCAGGCTGCTGTGGTGGCCAAAGAGAAAGTTGGAGCAATAATCGGAGGAGACAAGAAAAAGGCAGAAGGTGCAAAAGACAAGAAACCGCAAGGAGGTGTTGGTGACATGTTGAGCGGTGCGATCGGCAAAGCTGGTACAGACGCTGCGGCCGATAAGGCAGCTGAACAGGCGTTGTCCATTGGGAAGGGCCTTTTCAAGTGAGCCTGGATACTTTAAGCCTGAACTCTCTCACTCATCGCTGTATGCTAACTGGACCCCATCCTTCTGCAATTATCTTCTAACTTTCAGCACTGAATAATATGTGTCTCCAGGAGCTGTACATTTTGTCGTCTAGAAATAGGCAATGTCTGAAGCAGATAACTTTCTGTATATTTTGCAGTACCTTTTTGAGCTCAAACTTAAAAAATGTTTGTTGTAATTTCAGAAACTTTGTATAAAAGCACTTTCAGAAATAAATTATGAAAATAAATTAACTATTATTTGGACAATGGCAATAAACTTAACAGGATGCTTTATGAAAATAAAGAATTAGAGAGCCATTGCTCAGTTAGAGATTGAGTTTGAACAGGTTTAAGTTCATTTATGTATTTTAACTATCTTTTGAAATGTTTAAAATTATTTCAGAGTAACATCACAGAATCAATAAAATACATTTCTAACACTTACTGATGTTTGTTCTGTTGTTTTCCCACCAAAATGATGTCACTTCCTGGAGGGCTGGTTTTGGTTAGTTAAAGGGATATTGGACTACCTCTTAAAAAAATATGGTGCGTTCGAGTCATGTTGGACAGATCATATTTAAGAGTTTAATGCACCTGAACGGCACCAAAAATGACTTATTACAATTTACTCAGGATTTTCTTTGTCACAAATTTATTAAAATATATTTAACTATTATTTTTCTCAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_05616519_05617045.mRNA False 993 mRNA 0.37 3 5615806 5617073

Neighbor

gene id symbol gene type direction distance location
CI01000063_05473346_05474995 SIX2B, SIX2A, SIX2 coding downstream 140049 5473338 ~ 5475757 (-)
CI01000063_05353701_05355458 ZFP36L2 coding downstream 259522 5352758 ~ 5356284 (-)
CI01000063_05304502_05306803 HCAR1-4 coding downstream 309003 5304439 ~ 5306803 (-)
CI01000063_05257128_05262520 KCNG3 coding downstream 352475 5256958 ~ 5263331 (-)
CI01000063_05252331_05253850 COX7A3 coding downstream 361956 5250005 ~ 5253940 (-)
CI01000063_05627849_05635031 SNCGB, SNCG, SNCA coding upstream 10685 5627758 ~ 5635031 (-)
CI01000063_05652987_05657351 BMPR1AB, BMPR1A, BMPR1AA coding upstream 35203 5652276 ~ 5657351 (-)
CI01000063_05689441_05689773 NA coding upstream 71230 5688303 ~ 5689881 (-)
CI01000063_05690755_05712496 LDB3B, LDB3 coding upstream 73191 5690264 ~ 5712923 (-)
CI01000063_05729622_05743365 OPN4B coding upstream 112549 5729622 ~ 5743365 (-)
G265793 NA non-coding downstream 49430 5559531 ~ 5566376 (-)
G265742 NA non-coding downstream 166428 5449092 ~ 5449378 (-)
G265733 NA non-coding downstream 201138 5414430 ~ 5414668 (-)
G265732 NA non-coding downstream 201939 5413427 ~ 5413867 (-)
G265714 NA non-coding downstream 238830 5376744 ~ 5376976 (-)
CI01000063_05950749_05954473 NA non-coding upstream 281299 5949613 ~ 5954558 (-)
G265890 NA non-coding upstream 305444 5922517 ~ 5926035 (-)
G265889 NA non-coding upstream 311669 5928742 ~ 5931804 (-)
G265802 NA non-coding upstream 521618 6138691 ~ 6151199 (-)
G265789 NA non-coding upstream 558604 6175677 ~ 6177315 (-)
G265567 NA other downstream 361866 5183279 ~ 5183287 (-)
CI01000063_05189361_05189645 CRIPT other downstream 425189 5188403 ~ 5189645 (-)
CI01000063_02725759_02726399 NA other downstream 2889271 2725759 ~ 2726535 (-)
CI01000063_02326799_02327290 CBY1 other downstream 3288087 2326741 ~ 2327309 (-)
CI01000063_02177769_02178239 NA other downstream 3437470 2177747 ~ 2178395 (-)
G265976 NA other upstream 671085 6283058 ~ 6290946 (-)
G266797 NA other upstream 1672422 7289495 ~ 7290224 (-)
G266660 NA other upstream 1822012 7439085 ~ 7441435 (-)
G265709 NA non-coding downstream 181303 5360758 ~ 5365398 (-)

Expression


Co-expression Network