CI01000063_05673923_05678546


Basic Information

Item Value
gene id CI01000063_05673923_05678546
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5673829 ~ 5678725 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_05673923_05678546.mRNA
ATATAAAAGGGTGTTATTTGGGTATAAGATGTGAATTTAGATGTACAACTGACTGTATCTGACTTGATACCAAAAAAAGTGCAGGAGGGTAAAAATGAATCTTTTTGTGGGTTCATCTACAAAAAAGAAAATCGAGTGGAAAGTGCAGAAAGTTGAAAGGAAGGAAACTAGGGCGGAGGTTTGTGGCAACAGACACAGGGCTCTATCCAGACAGTCGTGGGTTCAAGAACACACTGATGATGGTGTGCGTAGTCTATTGAGGTCATGCTGCTCTACCAATCACCCACGTAGAGGATCACAGACCACAGTGCGGACCTGTGCAAGCCAATTCCTTTTGGACAAGGAGAACAAAATCCATTTTACTAAGTGGCTAGTCCCTCTGTGTATAGAAACACATGTCATCCAGCTGGCAACTGAAAGTGACATTGCCCCCTTCCCCAAAAAAACATCAGTACAAGAACAGATTTGTCTGAGCAATTGTATGGGAATCTCAGGCAGTGCGAGTGCAGTTCATGAATGCGAAATTGTACGGCAACAGGGCAGGATGGGGTTAAGGGTTAATCTCTGGGCTTCGGTAATCAAGGTTTTTGTACGCTCCTTCTCCGCTACGAAAATACAGCCAAAGGTGGAGGAAGTAAAGAAAAACTGTGGCATTTACTAATGTAGTTGGCTCTGGATTGAGTCTTTGAAAAAGAAGTGACACTCTGGTAACAGAGCAGAGTGCTCCAATCATTTACCGGCAGTTTAATTTCACAAAGGCTTCTGAGAAATAAGACAGACCTTGATTTACAAAAGAAAAAAAAAAAAAGTATAAAAACACACAGACCAAACAGAAATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_05673923_05678546.mRNA True 840 mRNA 0.42 4 5673829 5678725

Neighbor

gene id symbol gene type direction distance location
CI01000063_05639341_05650366 NA coding upstream 23147 5639290 ~ 5650682 (+)
CI01000063_05597755_05613489 GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S coding upstream 59183 5597324 ~ 5614654 (+)
CI01000063_05563124_05584474 NA coding upstream 88725 5563124 ~ 5585104 (+)
CI01000063_05490285_05556254 PRKCEA, PRKCE, PRKCEB coding upstream 117367 5490285 ~ 5556462 (+)
CI01000063_05466326_05468126 SIX3, SIX3A, SIX3B, SIX3.L coding upstream 204547 5466052 ~ 5469282 (+)
CI01000063_05894405_05894580 NA coding downstream 215680 5894405 ~ 5894677 (+)
CI01000063_05922194_05935361 ITGB3B, ITGB3 coding downstream 243469 5922194 ~ 5936249 (+)
CI01000063_05946534_05948489 NDEL1A, NDEL1B, NDEL1 coding downstream 267809 5946534 ~ 5948532 (+)
CI01000063_05954897_05957678 ARMC7 coding downstream 276172 5954897 ~ 5957753 (+)
CI01000063_05973598_05981144 NA coding downstream 294873 5973598 ~ 5981144 (+)
G265198 NA non-coding upstream 183023 5490577 ~ 5490806 (+)
G265173 NA non-coding upstream 238189 5435399 ~ 5435640 (+)
G265142 NA non-coding upstream 290905 5382707 ~ 5382924 (+)
G265141 NA non-coding upstream 291350 5382191 ~ 5382479 (+)
G265153 NA non-coding downstream 11491 5690216 ~ 5712916 (+)
G265246 NA non-coding downstream 26368 5705093 ~ 5706882 (+)
G265252 NA non-coding downstream 38895 5717620 ~ 5717948 (+)
G265253 NA non-coding downstream 41406 5720131 ~ 5720622 (+)
G265254 NA non-coding downstream 44421 5723146 ~ 5723354 (+)
G262436 NA other upstream 2959312 2713615 ~ 2714517 (+)
G262423 NA other upstream 3430864 2241408 ~ 2242965 (+)
G262194 NA other upstream 4528822 1139352 ~ 1145007 (+)
G262060 NA other upstream 4963275 710110 ~ 710554 (+)
G261984 NA other upstream 5006447 665800 ~ 667382 (+)
G265391 NA other downstream 235058 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 656553 6335618 ~ 6338283 (+)

Expression


Co-expression Network