CI01000063_05894405_05894580


Basic Information

Item Value
gene id CI01000063_05894405_05894580
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5894405 ~ 5894677 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_05894405_05894580.mRNA
ATGCAGTCAGTCTTGCGTCCTGTCCGAGCTCAGCTCAATCCGGGAGAAATCTTGACCGCACATTCCCAAATTTCCACCAGCGCCATCCAGCGCCGCAGCCAATACATGAAGATCTCGCGATAACGACGTTCTCTAAACAATCAGTTCTCGCGATAAAAGGCTTCCCTTTGGCTTGAGGACCGATTTGCTACCATCTTCTGGAGCTAGTTGGTACATCAGAATGCCATTACGTAACGGGTTTTGGTTTTGTGTAGAGAGAGGTGTGAATTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_05894405_05894580.mRNA True 273 mRNA 0.49 1 5894405 5894677

Neighbor

gene id symbol gene type direction distance location
CI01000063_05673923_05678546 NA coding upstream 215680 5673829 ~ 5678725 (+)
CI01000063_05639341_05650366 NA coding upstream 243723 5639290 ~ 5650682 (+)
CI01000063_05597755_05613489 GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S coding upstream 279759 5597324 ~ 5614654 (+)
CI01000063_05563124_05584474 NA coding upstream 309301 5563124 ~ 5585104 (+)
CI01000063_05490285_05556254 PRKCEA, PRKCE, PRKCEB coding upstream 337943 5490285 ~ 5556462 (+)
CI01000063_05922194_05935361 ITGB3B, ITGB3 coding downstream 27517 5922194 ~ 5936249 (+)
CI01000063_05946534_05948489 NDEL1A, NDEL1B, NDEL1 coding downstream 51857 5946534 ~ 5948532 (+)
CI01000063_05954897_05957678 ARMC7 coding downstream 60220 5954897 ~ 5957753 (+)
CI01000063_05973598_05981144 NA coding downstream 78921 5973598 ~ 5981144 (+)
CI01000063_06035175_06080992 ARHGAP12, ARHGAP12B coding downstream 140498 6035175 ~ 6080992 (+)
G265324 NA non-coding upstream 6980 5884368 ~ 5887425 (+)
G265284 NA non-coding upstream 39142 5819775 ~ 5855263 (+)
G265262 NA non-coding upstream 94562 5753648 ~ 5799843 (+)
G265276 NA non-coding upstream 97929 5795455 ~ 5796476 (+)
G265261 NA non-coding upstream 145191 5749010 ~ 5749214 (+)
G265333 NA non-coding downstream 3710 5898387 ~ 5952501 (+)
G265391 NA non-coding downstream 19106 5913783 ~ 5919029 (+)
G265395 NA non-coding downstream 65012 5959689 ~ 5960136 (+)
G265397 NA non-coding downstream 66495 5961172 ~ 5961486 (+)
G265364 NA non-coding downstream 72916 5967593 ~ 5970470 (+)
G262436 NA other upstream 3179888 2713615 ~ 2714517 (+)
G262423 NA other upstream 3651440 2241408 ~ 2242965 (+)
G262194 NA other upstream 4749398 1139352 ~ 1145007 (+)
G262060 NA other upstream 5183851 710110 ~ 710554 (+)
G261984 NA other upstream 5227023 665800 ~ 667382 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 440601 6335618 ~ 6338283 (+)

Expression


Co-expression Network