Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000063_05950749_05954473 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000063 |
| NCBI id | null |
| chromosome length | 7808773 |
| location | 5949613 ~ 5954558 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000063_05950749_05954473.mRNA | False | 845 | mRNA | 0.47 | 4 | 5950670 | 5954531 |
| TU301688 | True | 658 | lncRNA | 0.44 | 2 | 5953658 | 5954558 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000063_05911229_05918849 | NA | coding | downstream | 31627 | 5911175 ~ 5919043 (-) |
| CI01000063_05903771_05910321 | SYNPO2LB | coding | downstream | 40232 | 5903727 ~ 5910438 (-) |
| CI01000063_05896710_05901541 | NA | coding | downstream | 49129 | 5896378 ~ 5901541 (-) |
| CI01000063_05849340_05854550 | NA | coding | downstream | 94667 | 5849314 ~ 5856003 (-) |
| CI01000063_05783589_05833813 | USP54B, USP54 | coding | downstream | 115946 | 5783589 ~ 5834724 (-) |
| CI01000063_05962667_05971952 | ACSF2 | coding | upstream | 7801 | 5962332 ~ 5971952 (-) |
| CI01000063_05983940_05990611 | NA | coding | upstream | 28924 | 5983455 ~ 5990611 (-) |
| CI01000063_05992697_06005239 | SLC16A5A, SLC16A5 | coding | upstream | 38048 | 5992579 ~ 6005359 (-) |
| CI01000063_06011344_06017382 | KCTD2 | coding | upstream | 56132 | 6010663 ~ 6017382 (-) |
| CI01000063_06018383_06022776 | NA | coding | upstream | 63552 | 6018083 ~ 6023487 (-) |
| G265889 | NA | non-coding | downstream | 18866 | 5928742 ~ 5931804 (-) |
| G265890 | NA | non-coding | downstream | 24635 | 5922517 ~ 5926035 (-) |
| G265793 | NA | non-coding | downstream | 384294 | 5559531 ~ 5566376 (-) |
| G265742 | NA | non-coding | downstream | 501292 | 5449092 ~ 5449378 (-) |
| G265733 | NA | non-coding | downstream | 536002 | 5414430 ~ 5414668 (-) |
| G265802 | NA | non-coding | upstream | 184160 | 6138691 ~ 6151199 (-) |
| G265789 | NA | non-coding | upstream | 221146 | 6175677 ~ 6177315 (-) |
| G265776 | NA | non-coding | upstream | 231403 | 6185934 ~ 6188664 (-) |
| G265960 | NA | non-coding | upstream | 248434 | 6202965 ~ 6235379 (-) |
| G266002 | NA | non-coding | upstream | 300493 | 6255024 ~ 6255223 (-) |
| CI01000063_05616519_05617045 | NA | other | downstream | 333558 | 5615806 ~ 5617112 (-) |
| G265567 | NA | other | downstream | 696730 | 5183279 ~ 5183287 (-) |
| CI01000063_05189361_05189645 | CRIPT | other | downstream | 760053 | 5188403 ~ 5189645 (-) |
| CI01000063_02725759_02726399 | NA | other | downstream | 3224135 | 2725759 ~ 2726535 (-) |
| CI01000063_02326799_02327290 | CBY1 | other | downstream | 3622951 | 2326741 ~ 2327309 (-) |
| G265976 | NA | other | upstream | 333627 | 6283058 ~ 6290946 (-) |
| G266797 | NA | other | upstream | 1334964 | 7289495 ~ 7290224 (-) |
| G266660 | NA | other | upstream | 1484554 | 7439085 ~ 7441435 (-) |
| CI01000063_05729622_05743365 | OPN4B | coding | downstream | 155007 | 5729622 ~ 5743365 (-) |
| CI01000063_05690755_05712496 | LDB3B, LDB3 | coding | downstream | 185449 | 5690264 ~ 5712923 (-) |
| CI01000063_05689441_05689773 | NA | coding | downstream | 208491 | 5688303 ~ 5689881 (-) |
| G265732 | NA | non-coding | downstream | 484505 | 5413427 ~ 5413867 (-) |
| G265714 | NA | non-coding | downstream | 521396 | 5376744 ~ 5376976 (-) |
