CI01000063_07205887_07209986


Basic Information

Item Value
gene id CI01000063_07205887_07209986
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 7205855 ~ 7210671 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_07205887_07209986.mRNA
ATAACGCATAGAGATCTGCTCTTTGTGAAAAGGTAAGCTTTAAATGTTTATAATTTTTAAAAGACAAAATAAAAAAATAAAAAAAATCACTTAAGCACAGTAATTTAATTACTTGTAAATCCCAAGAGTTTGCCTTCTTGATTAAGGCAAATTAACCTAAATCCATTTTTTTTTTAAATTAGAAACACATACTTCATATTAATATTTATTTTTTAAAATGTATATAGATAAATAATGCAAAGTCTAATGCTGTTTTTTACTTTAACCTTTAGATGCTTTCCTTATGCATCCAAGTGTTTGCCGTGCTGGTTGTCTGTTCGGCTGACACTGACAAAAGAGATATTTCAGTAAGTATGATCGAATTGGTTAATATAATTAATGTTATAAATAAAATAAGACCAACATTTTACAATATTCTTACATTATAACTGCAGTTGTACAGTAACTGTGCAAATATTATTTCACATTATTTCATTGCAATGTCTTCTAGTATACATTCAGAGCTTGGAATATTGACCAACCTTTAAAGGAGCAACTTGCTGTTGTCTATAAGGTAGTGGTGCATTTAAAGTGATTTGGTATCCTAAATGTTTCAATTTCTAAAGGAAGAGTGGTATAAGCATTGGTTTTCTTTCTCTGTGTATTTATTTAGGAGATGGAAAGCTTGAAACGTGAACAAGCAGTAATGAAACAAAAGCAAGAAGCCTTGAGCCAGGGCTATATAAATTTGTCTTTGATAGGCAGCAGCCATCTGCCGTATACCCTCACCCAGGGTGAAGATGGAGCAGAAGGCTCCAGTGTGGACGACAGTGATGAGGCCCTTGACCCCTGCTTTCACTATTCCGTGTTGGACCAAGCCTGGAGAGCTACAAACTACAGCTCCAAGAAGGTTGCTTGCGACCGCAATGTCCAGTGGAATGGCTGGTACCGTCTCTTCTACCGTGGAAAAACCATCCAGATGCCTGAGAAGTGTGTGAAGAAAGAAATGTGCGGCACACACGCTCCACTGTGGCTCGTCGGCGGTCACCCCCGGATACGAGACGGAGTAGTCACCCGCAAAGTGAAAGCATGTAAGGGAAACTACTACGTCTACAAGTTTGTCAAACCGGAAGCTTGCCATTTGGCATATTGTGCAGACATTAACACACTTGTCTGTGGAAAGTGCAAAAAAAGTGAGTCTTGCATCAGCAGAGACAAAATCACCTGGATGTGTAAGAAAAACAAAATGAGAGTGAAAGCAAACGTCCATTTTTTTGCCACCTACCCGGCCAGCATCTCAGGAAAAGTGAACACGATTGTGTACAGGAAAGTGTATGTGAATCAAGGCGAGGCTTTCGACGCTCGCACCGGGGTATTCAGAGCTCCATTTTCAGGCGTCTATCAGTTCTTCTTCTCCACACAGACTGGGGGGAGTGGGACAACTGACCTATGGCTTGTTGTAAATAATTACTGGGTGGCTGTCTCCCATAGTAATGTTCAGGGCTCCAACTCAGTTGGGAATCTCTCTACGTACATGACGACTCTGCGCAAAGGTGCTACGGTTTATGTGACCCAAAATCGCGGCAAATCTTGGGCCACTGGTGCATCCAACACCATTGCTTTTGGGGGTTCATTACTTATGACCAAAAATTGGTCACTCACCATTGTGAACACCTGTAAATTTGGTCTTGAGGTACGGTTTAGCTCGCGCCCGAGAGGGGAGGGGCTTACGTTAGACTGGCAGGATACCGAAGCCACAGTGTGTTTAGGCGAGACGAGTAAAGCTCGTGGAAAAAGGGATGAGAGGTGCGACTCTCGATGTAGCGGACTATCACTCAAACACCGGGAAGCTCGAAAACTTGTGTTAAGTTTTAAGGCGGCGGGAGAGTGTGTGGCTTTAACTATTTCAACCTTTAACAGACGAAAACAACAACACGAAAGTTTGGAGTTCGGAAAGGCGGACTTTGTTCTTCTGGACAATGTGTCTTTGGAAGAGTTTATGGCCAACCTTAAACTCAGCCATGATGAAAGAGTTACTCAAATCATCTTGCAAAACATCTTGAAGTGTGAATCATATTAATGGACAGATACAACATATGCATTTGGAATAAA
>TU302710
TAGATAACTATTATGTTAAACTAGCTAGTAATAGTAAAGAGGTTAAATAAAGTAATATTATTGTCCCAGTGTCGTAGAGACACAGGTGGGGGCAGCAGAGTCAACTCATTGTGTTTAATCAGGGAGGATGTCACTTGGGCACAGATACAGTAGCTGCACAGAGCAACCTGAAGCCATCTTCAGTCCTCATTAAACTTAAACACGTTCTTGTGTCCCGAGGTTACCGCAAACACGTTGACAGCACGTGCCAGAATCATGTTTTACAACATGAAAGAAATGACGAAAATGTGATTTATTAATGTTTTTGCAGACCAAAAATTGGTCACTCACCATTGTGAACACCTGTAAATTTGGTCTTGGTTAGTTCTATTGTCAGATATGTTCTAATTAACTGAAGTTTTATGCTGAACTACTGTTAGACAGTTCACTCAAATGGGATTTTATAGGCATTGCCTTATATGGTCAGAGGAAAGACGGACATTCCAGAGATATTCAGAAACTCACTGATGGTGACTAATAGTAGTCTTCAAAGAATTCTAACTATGCACTATTCAAATGTCAATATCCCCTTCAAATTACTGATAATTAAAATGTTAACTATGGTAATTCATTTTAACATTGGCTCATTTAAACAAAGTGGTACGTATTTTGTTTTAAACACACATATTTTTATTTTCTTCATTAGTAAGCGATCCAGTGCAGTGTATGCTAACCA

Function

NR:

description
LOC571499 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_07205887_07209986.mRNA False 2091 mRNA 0.41 9 7205855 7210671
TU302710 True 715 lncRNA 0.36 1 7207154 7207868

Neighbor

gene id symbol gene type direction distance location
CI01000063_07147043_07192035 MYO1D coding downstream 13820 7146006 ~ 7192035 (-)
CI01000063_07114269_07117313 PSMD11 coding downstream 88057 7113407 ~ 7117798 (-)
CI01000063_07092189_07106801 OGFOD3 coding downstream 98100 7092090 ~ 7107755 (-)
CI01000063_06652744_06663333 DHX8 coding downstream 542265 6652136 ~ 6663590 (-)
CI01000063_06404520_06407506 PSME3 coding downstream 798179 6403824 ~ 6407676 (-)
CI01000063_07217465_07224133 NA coding upstream 6315 7216986 ~ 7224322 (-)
CI01000063_07356051_07365604 OSBPL7 coding upstream 145331 7356002 ~ 7365604 (-)
CI01000063_07369762_07372353 MRPL10 coding upstream 159041 7369712 ~ 7372353 (-)
CI01000063_07377062_07377408 PRR15LB coding upstream 165662 7374771 ~ 7377408 (-)
CI01000063_07394616_07396752 NA coding upstream 183945 7394616 ~ 7399019 (-)
G266659 NA non-coding downstream 81827 7078351 ~ 7124028 (-)
G266746 NA non-coding downstream 137607 7068035 ~ 7068248 (-)
G266740 NA non-coding downstream 149548 7056070 ~ 7056307 (-)
G266722 NA non-coding downstream 181250 7024392 ~ 7024605 (-)
G266642 NA non-coding downstream 273431 6932077 ~ 6932424 (-)
G266772 NA non-coding upstream 14546 7225217 ~ 7225417 (-)
G266677 NA non-coding upstream 55850 7266521 ~ 7276565 (-)
G266795 NA non-coding upstream 71261 7281932 ~ 7282258 (-)
G266808 NA non-coding upstream 121668 7332339 ~ 7332614 (-)
G266818 NA non-coding upstream 140666 7351337 ~ 7351637 (-)
G265976 NA other downstream 914909 6283058 ~ 6290946 (-)
CI01000063_05616519_05617045 NA other downstream 1588743 5615806 ~ 5617112 (-)
G265567 NA other downstream 1951915 5183279 ~ 5183287 (-)
CI01000063_05189361_05189645 CRIPT other downstream 2015238 5188403 ~ 5189645 (-)
CI01000063_02725759_02726399 NA other downstream 4479320 2725759 ~ 2726535 (-)
G266797 NA other upstream 78824 7289495 ~ 7290224 (-)
G266660 NA other upstream 228414 7439085 ~ 7441435 (-)

Expression


Co-expression Network