CI01000063_07450175_07455382 (ZNF646)


Basic Information

Item Value
gene id CI01000063_07450175_07455382
gene name ZNF646
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 7449162 ~ 7455585 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_07450175_07455382.mRNA
AGTGCCTGCACTTGTATCATCCTCCCAAGGACATTTTTCCAATGGAATGGAACAGAATGTATTCTCAGCCAATTGTTTGAATGTTGCCTTCACGTTCAGGCCTCACCTAACAAGTCATTTTGATAATAGTGAGGACAGGTGTGTCCCTCACACTCATTCAAACTGGCTCTTATTGACATTTCTTATCATTATACTATAACATTATGGCTATGCAAGAGCCAGGTCGGACCAAAGGCTTTTCGTGTAAACATTGTGGTGTAGTATGTGCAAGCATGCCCAGTCTTTTGGAGCATACAGACACTTTTCATCAGTCAGAAGAGGAACGCAAGTTCAAATGTGAGGAATGTGGACGAGGCTACAGACATGCTGGCAGCTTGGCTAACCACAGAAAAACACACGAGGTTGGCTCTTTTCAGTGTCATATATGCTCCAGGAAGCTCTCCAATGCATTGGCTCTCAAAAGCCACCTGCGCATCCACACATCTAGAAAGAAATATTCTTGCACAGAATGCGGAAAGGCTTTTCGTCTGGCAACTCAGCTGGTCACCCATCAAAAGGTCCATCGCAATAAAGAGTCTCGAGTCAGGACAAACAATGTTGCAAAAAGTCACATTGAAAGTGGTTATAAAGATGATGAGTTGCTGCAACTAGATGATGTGGATTTTGACATTATGCCAGATTTGCAGCCAGACATGAAGCTGAATATTGCTCCAGTGAGCAGCCTTTGTAATGGTGCAGTGTCCGAACACATTTCAAACTCCACCCCAGAAAGTGACACGGCAGCTGAAGATGATGCTGGAGACAGGCCGTTTAAATGTGACTTATGTGATAAGACATACAGACATCATGGCAGCCTCATAAATCATAAGAAAACTCACCAAATGGGATTATTTGAGTGTCCAGTCTGTTTTAAACAGTTCAACAATCTTGCTGCCCTTATTAGTCACCAGCGAATCCATAGTAAAACCCGAGGTCGTCTCAGTGCACAGAACTCTAAAGCTGCCCTCACAGACTGCAAGCAAGAACTTGCCTCTCATGTTATGCCACAGAATGGTGATACTAATATACATTTTTGTCACCTTTGTCAGGTTACTTTTGCTAATGATGATGAGTTTCAAAATCATATTCTGTTGCACAACTCCTCTTCTGTGTCATTTGAGCTCCCTACCAATTTGTCAGAGGAGCACAATTTCTCGTACAATGATAGTGTTAATCATTCCCCAGAGACTAATCCTTATCCCCCCAATAGTGACACTCCACCGTTGCCTCCGTTACTCAATAAAGTTGATTATGACCAATCAGATGGGCCAATGGAAAATGGTCATATGTATCTACCCAACTCTTTAGATCATAATTCATTGACTCTACATGCTCAGGGACAGCCAATTGCCCTACCATCAGAGAACCTCAACCCTGATTGTTCAGCACAAGGTCTTGATAACATCAAAGTAGAAGATGCCGACAGTTCTGATCGCCGCTTCAGGTGCCACATCTGTGGCAAAAGTTACAGGCATGCAGGCAGTCTTATAAATCACAAACGATCGCATCAAACCGGGATCTTTCAGTGTTCCATCTGCCGCAAGAGCTACCCTCATTTGGCAGCTCTGCGGAGCCACCTTCGGATTCATAAGGGAAGACCCACATCTTTGCTTGCTAGTTCCGAGGGTGACTGGCTTTCCTCAGAGCCCTTAACACATGAGAACCAACAGGGCTGCTTTCCATCACATGAGGGAGATGTAAGTGGAATATTAGGCCTTCCTCAGGACCTGGTAGATTCTGTGCAGCATGAATCTGATGAGGAGTATGTGAATGAGACAAATGCTACTGAATTTCATGAGCAGTTTGACAATTCCTTCCCAGATGAGCACCTACCTCAGGACGAACACCTCATGGAGAGGCACATGTGTGCAGACTGTGGTAAGACATTTACTGATATCGCAGGAATCAAGTCACACATGTGTCCTCTCCTGAATCAGCAGTATCAGACCATGACGAATGACTCATCCGGTCACATGGACTTTCACAACACGAAGCATCAACATTTCTTAGGACAGTCAGGTGAGGATATTGGTTTTGAGGGACACAATGGCAGTGCAGCTGAGTCTTATTTTAGACAGCAGACCTTTCATGACAACATTCATAATCAGATGAGTGACAGCGAAGATCATGAAGATGGTGAAGAAGAGGATGATGGAGAGATGTATCACTGCTCAGTTTGTGGGAATCACTATACTAGCATGCGTGCACTGCGAAGCCATCTCCGAGGCCACACTCAAACTCATGGTGCACCTTCAGCATCTGGTCCATCATCTGTGTCACCTCTGGAGGTCAAGAGAGATGAACAGAGTGAAAATCAGCAGAGTGAATGCAGCCTGATTATCTGCAGTACTTGTGGAGAGAGCTTTACAAAGAAACAGGACCTACAAGCCCACCAGCTCTTGCATAGCAATATAGAAGGTAATCCGCCAGAACAGTTTGTCACAGACCACCAGAATGAGCTCAAACCAAAAGTGGAAATGGAAGATATTATTTGTGGGAAATGCGGCATAAGCTGTAGCGATCTTTATCACCTCAATAACCACAACTGCACGGGACAACGAGATGGACAAGTGGAGGAAAAATGTGTGGAGAAACCGCTTCTTAGAAATACATTTCAACAAGAAGTTTTACAGGAGAGTCCACATGATGGAGAACGACAGTACAAGTGTGACCAATGCGGTCGTTCGTACAGGCATGCTGGATCATTGCTCAATCATAAGAAGTCTCACAAAACTGGAGTGTTTCGCTGCTTTGTTTGCCAAAAGCGTTTCTATAATTTGTTGGCCCTCAAGAATCACCAGAGGACACACTTCGATGTTAAAAAGCATAGTTGCACAGAATGTGGGAAAGCATTCAAAATCTATAAACAACTATTGAACCACCAGAGGGTACATCAGGAAAACAAGGCTAAGATTGAAGAGCTCAACAAACAAATTCAGACACTCATGCAGATGAGTGGAAATGCCTCAGGGAGTGGAATGCAGGCACTTAATTTCAGCAGAAGGAGAATGAGCAGACGCCATAAGCAACGGCAGACCTCTAACGGTGATCAGTCTAGCCAAGAAAAGGAGGGCCAGATGGGAGATCCCAGGGACCCTCGGCCTTTTGTCTGTGATCAATGTGGGCGAAGCTATCGGCATGCAGGAAGCTTGGTCAACCACAAAAACTCGCACAAGACAGGTGAATATTACTGTGCTTTGTGCAACAACACTTATTCCAACCAGCTAGCAATGAAGAACCATTTACGAATACACTTTTCCGTCAAAAGATACCGTTGCCAAGAATGTGGAAAGGCCTTCAGAGGAAACAAACAGTTACTCAACCACACTTGTTCGACCACTAAAAGAAAAGCAGCAGCAAGAGGAAAGGTCAGGGGCCACAAACAAGAAAAGGATTTAAAATGCAAGCATTGCCGTCTTGTATTTCCAGATAAGGAACTGCTTGACGGACACACCTGTTGCAAAGAGACTGTCCCTGATTCTGTCCCCCCAGGAAATGTAGACGGTGACACTGACAGTACAGCCCTAGAAAAAGAGGAACGACCATTCAAGTGTAACATTTGCAGTCGAAGTTACCGTCACGCCGGTAGCTTGTTGAACCATAAGAACACACACAAAACAGGCCATTTCACCTGCTCCTTCTGTGCCAAGCCCTTTTCCAATCCCATGGCTTTACGAAACCACACACGCATTCACACGCAGAAGAAAAAGTATGTCTGTCCTACTTGTGGTAAAGCTTTCCGTCTCTCCAGTATCCTGTACAACCATCAAAAAATCCATGCACGTGGAATAACTCATTACAGCTGCCAAACGTGTGGCAAACGCTTCCAGGGAAAGTCTGGGCTAAAGAGACATCGCTGTTACCGAAACGGAAATCCGAACTCTACTGTAAATCAAGATGGTGTGGACAAATGCTATACATGTGATCAATGCGGACGCTCTTATAGACACGCCGGTTCCCTTCTCAACCACAAGAAGACTCATTCTGCTGACCTCCTGCACTGCACTCTCTGCCTCAAAACATTCACAGATCCTCTGGATTTAGAGAGCCACTCTCAAATGGCTCGCCACTGCTGCCCAGATTGCGGGAAAACCTTCTGTGAGTTTTCACACATGCAGAGCCACATGGAGGTGCATAGTAAGGGACTCCCCTATTACTGCAACATGTGTCAACAGAACTTCCCAAACCTGGCTAGTTTTCAGCAGCACCAGGAACTCCATGGCAGCTTACAAGGGCAGTCACACCATGAGGAAGGTATGCAGATGCAGCAGGATTTAGACTGGGACTCAACACTGGACCAGCAGATAGGAATTCAGAGCCTTCCTAAGATCGATTCAGCTTTCAGCCAAGTGCACGGATTCCCTGAGCCGCAAGACCAGCAGGAAAGTAGCGAGGAATACGGTAGGGAGGAGAAGAGTCATGTGTGTGAGCATTGTGGGCGCACTTACCGCCACGCTGGTTCACTGCTCAACCATAAGAACAGCCACAAGACCGGCTCCTTCTTCTGCTCGGTCTGCCAAAAGGAGTTCTCCAATCTCATGGCACTGAAGAATCACCGACGCATTCACACAGAACCCAAACGTTATCAGTGCCTAGAGTGTGGCAAGGCCTTCCGGGTCTCCACCCAGCTTATCTGCCACAGGCGCATCCACACCAAAGAGAAGCCCTTCTCTTGCCTCCTTTGCGACAAGCGTTTCTCTAGCAAGTCCAACCTCCGGCATCATCAGAAGATGCATCAGAATACCCAACAGACCTACGAGACCTCCTTCAGTATGGATGATAACGCATTAATGGGACTGGGTGTGGACCCTTTCCTCTGAGGTCAGACTTCAGTCTTGCCACTCCAAGGGAAGATTTCAAAACAATATTCTATTACAAGAGAAAGACTCTCTCTCCACCCAAGGCCTAATGCCAATAATCGTACAACATCAGGTTTTCTGCTGTGCTTGTCCAGATGGTGTCGCACACAGATGCTAATCTCGGCAAGGCTTGCCTCCTTTACTGTTGTTTTTAAATATTGTTCTTTAAAGGACACTTAAGACTGGCATTGATAAGATACTACCTCTGGTAGGGACAGTAATACTGTAGACATTTTAGAATAAGTGACAGTGCCTGTCAGAGACCATTTTAGATGTTTATTTTATTTCATTTGTTTTGTGTTCCCACACAGTGCACAAATTGTATGGTACTATGATAGATCTCAGACTGAGAGCTTGGATGAGTATTTCTGTCCAACCTCTTACCCAGTGCTGCCTTCAAGAGTCCGACCGATTATTTGGCGTAATCGGAGGGGGAACAGAATAAGGTGTTCTGGATAAAAGGATACATGCTATCCTTCTCGTTATGTTTGTATTAAGTGCTTCCGTTTTTCAGGTTATCGTACTGCTCACGGTAGATGTGCTGTTATCATTTCATCGTCTCATTAAGGCCAATGTACACATGATGTTCCTGCAGTTTCATAATGATGACACTGGTAAAGCTGTTCAACGGCAAACTACCCTAAGGCCTGTCCTGTAGAAAATATCAAAGATATTTATTTATTTAAAAGTCACTATTTATACCTTAAGCATACTACTTGTCTTTATTACTGTTAAATGTGGTACACTTTATGCATGGTATTAAATGTGTGATAAATGCTAGATTGGTTGAGTACATAGGTATTTTAGATAATGGTTGTAAACACTTAAGAAATACCTCTTTAAAAGCATTCACAACAGTGTATTTAAAAGAACTGAAATATTTCAGTTTTCTTAGTGCATACTTTTCTAGTAAATGTTTTATGAAGTTGAAGTATATTCTTCACAAGATATTGGAGCACAAAAAATTTAATAAA

Function

symbol description
znf646 Predicted to enable metal ion binding activity. Orthologous to human ZNF646 (zinc finger protein 646).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_07450175_07455382.mRNA True 5872 mRNA 0.44 3 7449162 7455585

Neighbor

gene id symbol gene type direction distance location
CI01000063_07424567_07426570 NA coding downstream 22592 7424361 ~ 7426570 (-)
CI01000063_07411237_07413430 NA coding downstream 35732 7410175 ~ 7413430 (-)
CI01000063_07394616_07396752 NA coding downstream 50143 7394616 ~ 7399019 (-)
CI01000063_07377062_07377408 PRR15LB coding downstream 71754 7374771 ~ 7377408 (-)
CI01000063_07369762_07372353 MRPL10 coding downstream 76809 7369712 ~ 7372353 (-)
CI01000063_07458562_07458738 NA coding upstream 2230 7457815 ~ 7458854 (-)
CI01000063_07483274_07486490 NA coding upstream 27517 7483102 ~ 7487618 (-)
CI01000063_07493274_07509323 RNF157 coding upstream 37427 7493012 ~ 7509323 (-)
CI01000063_07516671_07521503 NA coding upstream 60861 7516446 ~ 7521861 (-)
CI01000063_07525686_07551770 DNMBP coding upstream 70101 7525686 ~ 7551770 (-)
G266669 NA non-coding downstream 10910 7436797 ~ 7438252 (-)
G266817 NA non-coding downstream 96898 7351818 ~ 7352264 (-)
G266818 NA non-coding downstream 97525 7351337 ~ 7351637 (-)
G266808 NA non-coding downstream 116548 7332339 ~ 7332614 (-)
G266685 NA non-coding upstream 8884 7464469 ~ 7467147 (-)
G266827 NA non-coding upstream 25049 7480634 ~ 7480877 (-)
G266647 NA non-coding upstream 56351 7511936 ~ 7515695 (-)
G266833 NA non-coding upstream 67133 7522718 ~ 7522990 (-)
G266670 NA non-coding upstream 136869 7592454 ~ 7592720 (-)
G266660 NA other downstream 7727 7439085 ~ 7441435 (-)
G266797 NA other downstream 158938 7289495 ~ 7290224 (-)
G265976 NA other downstream 1158216 6283058 ~ 6290946 (-)
CI01000063_05616519_05617045 NA other downstream 1832050 5615806 ~ 5617112 (-)
G265567 NA other downstream 2195222 5183279 ~ 5183287 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location