CI01000063_07483274_07486490


Basic Information

Item Value
gene id CI01000063_07483274_07486490
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 7483102 ~ 7487618 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_07483274_07486490.mRNA
AGTCGTCTGCTAACCAGAGGTGGTTTTACACTGAACGTTGGATATGAATTCTTTTCTTGTCTCTGTTACCTGTCTACTTTTTCTAATAGGTGAGAAAAGCTTCCATTCTTTTTTAGTGCACAGGCAGACGATGGTCATTTGTTCTAAATATAAGCACCTTGTTTGCAATGGCTAAATTGTATAGTTATAGGGCATCTACTTCAGTTATTTACATCTAAAACAGTTTTTTAATATTACTGGCTTGCAGATGGAGCGTTCCTTAAACGAGTATGCAGTAAGCAAGATGTATTGGAATATTTGAATCTTACCAAAGGCAATGAGAAATTCACAACTTGCCGTCCTGCACTGGACTGGACACACCCCACCATAGTGTATTTTGATATTTACCTCTATGGCATTCTTTCTATGGTATGACTACAAACAACCTATGTTCCAGTAGACCATTGTTCTGTGAAAACTGCTAAGATTTTTTTTATTGTTATTATTATTTATTATTATATTCATTCATTTATTTTTTGCAGATTGAAAAATCTCAAATCTTTGTACCTTTATTATGGATATCTGCGGTAAGTGTCAAAATTTGCAAATCTTCTAATTCCTAGATTATATTGCATAATTCAAAAAAAGAAATATAAATACTGGTTAAAGTAATTTATCCGTTTAAAGGATATTTATTTATTTATGTATTTATTTATTTTTGCTCACTTAGCGCTGGAACAACGAACGAATCTCTTGGGATCCTAAGGATTTCTGTGGCATTAAAAATGTGATTTTGCCAAAAGAACTGCTTTGGAAGCCAGACCTCTTTGTTACTGAGGCGTGAGTATATACAAATGATAAATCTGTATATTTTTTCTTAATTTATATAATACACACATTATACTTTATACATTATTATTGATGATTTTAAAAAAAACAAACACCTTGTTTATTAACTGTATAACATTGAGAGGAATTATTTATGTTGGAAATTCTAAAATGTATGATGTAAACTGGTATATTTGTTTTGACACAAACTCATTTTACCTGCCATGTTAAAAATGTAATTTATCAACATTTTTCAGTGTAGAGAAGGAAGATGGACCACTGAACCCATATTTGTATATTACTCATGATGGAAATGTGACAATGGAGGATGACCATAAAATTGTCAGTACCTGCACAATGAATGTACACAGATTTCCTTTTGATACCCAGACCTGCCACATAACAGTGTCTTCAATTAATCACTCAGATAAAGAAATAAAGCTGGTTCCTGCCTCCAATTCATCAAAGGCGACACAAGTAGCTCGGGAAAGCATATTAACCCAAGGAGAATGGGAATTCTTGAACATATCTGTCTCAAAGGAGAAAGATAATTATGACGGCCAAACATTTGACAGGATAAAGTACACGATTTCAGTCAGAAGGATGCCCCTGATGCATTTCATCAATTTTCAGCTACCTATATTGTTCTTCCTCATTGTGGACTTAGCTTCTTTTTTCATACCAGATAAAGGGGAGAAACTGTGCTTCAAAGTGACTGTGCTGCTGGGGATCTCTGTACTTATGCTCATCCTAAATGACATTCTGCCTTCCAAATCTCACAGATGTCCTCTGATTGCTACGTATGTCATTGTCATCTTTTCCTTCATGTTGTTGAGTCTTCTGGAGACGATTTTGGTGATATACTTAATAAATATGAGCTCTGAACAAGACACTAAGAGGGTTCAGAGACCTGAAGATCTCAATTCTGAAACAGATAAATGCAAAGGAGACAGCAGTGATCGCATGTGTTATTCTGGAATGGAGTCTCCTCTAGAGTCTCTGATGTTGAAGGAAATACACAGCAAAGAAAAAATTAATGACATGCACTTATTGCAGCTGATCCTGGAAGAGCTTCAGACTATCAAACAGACTCTTGTTCCCCATACTTTAAATGCCCAAACTGGTCAGAAGTACTGGTTAGGAATGGTCAAATGCATTAACAGGCTTTTCTTTGTGGTTTATCTCATCTCTATTTCTCTCTTTCTTGGTTTCATGTTTCGAGAATGGAAAGTTGACTAATTTCAGACTCTAAAATGGTGCATATAGTATTATATACATTTTGTCTTCCTGTTAAAAGTACTGTTATTCTTGAAAGAGCTGCAGCATATACTTCAAATTATCTTGTGGTACTTTTATTTCCCGTACCTTGCAATATGCCCGGCTTTGTATACTGTTTATTATGTGAAATAAA

Function

NR:

description
5-hydroxytryptamine receptor 3A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_07483274_07486490.mRNA True 2218 mRNA 0.35 5 7483102 7487618

Neighbor

gene id symbol gene type direction distance location
CI01000063_07458562_07458738 NA coding downstream 24248 7457815 ~ 7458854 (-)
CI01000063_07450175_07455382 ZNF646 coding downstream 27517 7449162 ~ 7455585 (-)
CI01000063_07424567_07426570 NA coding downstream 56532 7424361 ~ 7426570 (-)
CI01000063_07411237_07413430 NA coding downstream 69672 7410175 ~ 7413430 (-)
CI01000063_07394616_07396752 NA coding downstream 84083 7394616 ~ 7399019 (-)
CI01000063_07493274_07509323 RNF157 coding upstream 5394 7493012 ~ 7509323 (-)
CI01000063_07516671_07521503 NA coding upstream 28828 7516446 ~ 7521861 (-)
CI01000063_07525686_07551770 DNMBP coding upstream 38068 7525686 ~ 7551770 (-)
CI01000063_07578043_07590189 CPN1 coding upstream 90358 7577976 ~ 7590691 (-)
CI01000063_07605652_07611233 NA coding upstream 117995 7605613 ~ 7611233 (-)
G266827 NA non-coding downstream 2225 7480634 ~ 7480877 (-)
G266685 NA non-coding downstream 15955 7464469 ~ 7467147 (-)
G266669 NA non-coding downstream 44850 7436797 ~ 7438252 (-)
CI01000063_07377062_07377408 PRR15LB non-coding downstream 101767 7374771 ~ 7377408 (-)
G266817 NA non-coding downstream 130838 7351818 ~ 7352264 (-)
G266647 NA non-coding upstream 24318 7511936 ~ 7515695 (-)
G266833 NA non-coding upstream 35100 7522718 ~ 7522990 (-)
G266670 NA non-coding upstream 104836 7592454 ~ 7592720 (-)
G266846 NA non-coding upstream 201234 7688852 ~ 7689102 (-)
G266660 NA other downstream 41667 7439085 ~ 7441435 (-)
G266797 NA other downstream 192878 7289495 ~ 7290224 (-)
G265976 NA other downstream 1192156 6283058 ~ 6290946 (-)
CI01000063_05616519_05617045 NA other downstream 1865990 5615806 ~ 5617112 (-)
CI01000063_05189361_05189645 CRIPT other downstream 2292485 5188403 ~ 5189645 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004834 si:dkey-49c17.4 coding NC_007123.7 CM002896.2 31773435 ~ 31779178 (+)