CI01000063_07619266_07636507 (GPAM)


Basic Information

Item Value
gene id CI01000063_07619266_07636507
gene name GPAM
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 7619100 ~ 7637052 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_07619266_07636507.mRNA
AGTACATTATAATAGAGATGCAGAGTTAACAAGAGTGGCATGTGCGTTCGGTTTGGCAACCGCAAGGTTCATTCAGCTGAGGTGTTTTGTGCGCTTTGAGCTGTTGTCAACACTATGGGTTTTCTTTAACCCAAGGCGGTGAAGCATGTAGACTGAGCCATGATGCATTTATCTGCGAACAAACTTGTTTTGTTTCTGTTCTTCCTGAAATCTTTGTCAAAATGATCAGCTCACCTGAAACCACCTCAGCAGGTTTGGCGAACCTTATTTGTTTGCTGTGATTGGCTGGAACGCATCATTCGACATTCCTCTTATTCAAATGCAGCTGAGCTGGAGGTGCCGTGCAGAATAGATGGTACAATGGTTTCGCATTCTGGCTTTCTGTGGAATATTTTGCCGGCTGCAGTACTCTATTGTGAAAAACTGTAATCAGAGCTTGTCCGTGCTTTGACCTACAGCACAGTGGGTGGCAATGGACTGCCTCTCATTCTGTTTTTCTTTCCCTCCCATAGTTTTGTTGTTGATGTTTGGTTTGAAGAGAAGGGATGGATGTCCGCATGGTTCTGGGGGGTCCAGATAATATTCTACTGGCCAATAATCCTGACGCAGGAAGCGGCTGTCTGAAGCATCCCTGTGAGGACCAGGACAGAAGCTCCAGCCCGTCTGTCCTTCGTTCTGTGACCACCACGTGGAAGGAGGGTCTTCTGAACAGAAAGAGACCGTTTGTTGGAAGATGCTGTCACTCGTGCACACCCCAGAGTCAGGAGAGGCTGTTCAATCCCAGCATCCCTTCTCTAGGGCTCCGTAATGTGATTTACATTAATGAAACACATACAAGGCACAGAGGTTGGCTTGCACGGAGGCTGAGTTATGTGCTGTTTGTCTTGGAGAGAGATGTCCGGAAGGACATGTTTGCTCGCAATGTGGTGGAGAACGTGCTTAACAACAGCAGGCTGGAATGTGCTATCGTGGAGGTAGCATCCGAGGGTAATAGCGCAGATGCAGAGTCTGGAGTGGATCCCAAAGCTGTCAGTAAAGTTAAACGGAAAGCCAGAGGATTCCTGCAGGAAATGGTTGCCTACATCTCACCTGCCTTCATCAGATTAACAGGATGGGTGTTGTTGAAACTGTTTAATGGATTCTTCTGGAGCATTCAGATTCATAAAGGTCAGCTGGAGATGGTGAAGAAAGCAGCATCTGAGTACAACGCTCCCCTGGTCTTCCTTCCTGTTCACAAGTCCCACATAGACTACCTGCTCATCACCTTCATACTGTTTTGTCACAACATCAAAGCCCCTCACATTGCTGCTGGCAACAACCTCAGCATCCCCATTTTAAGCACACTCATACGCAAACTTGGAGGATTCTTTATTCGTCGTAAACTGGATGAAACCGCTGACGGAAAGAAGGATTACACAGAAGAATTGTTGCGGCAGCAGCAGTTTCTGGAGGTGTATTTAGAGGGCACGCGCTCTCGCAGCGGGAAGCCGTCTCCAGCACGTGCCGGCATGCTCTCCATCGTGGTTGATGCTCTCTGTGCCAGCAGCATTCCTGATGTTCTGATTGTGCCTGTTGGCATCTCATATGACCGCATTATTGAGGGAAACTACAACAGCGAGCAGCTGGGCAAACCTAAGAAGAATGAAAGTCTGTGGGGTGTGGCCTGCGGCGTGTTCAGGATGCTCCGGAAGAACTACGGCTGTGTGCGTGTGGATTTCACTCAGCCCTTCTCCCTTAAGGTTAGAGCAGCTCATCTCTGTTTGGTTGAATACAAAGCAGATCTCTCCCCTAATGTCTGGATCTTGCTTCTCTACCGCTTTAGGAGTACCTGGACACACAGCGCAGTCGGCATCTTCAGGCCTCTCTCACACTGGAGCAGATCCTTCTCCCCACCATCATCGCTGCACAGTATGGCCTTTAGACTGCCAGCCACCAACATTATCATACCTGATCAGGCTGTTTTTAATGGAGAAGATGAGGATCATCTGAATTCTAGAGACTTGTCAGATGAACCCTGGAGGAGGCAGGTCATCACTAACCTGGCCAAGCACGTTCTCTTCAGTAAGGGCAATCTAAAGACCATGATGCATAAACAGTTTCTTGTGCAGTGGGTGATTTTTCAAGCATTTGAGGGTGGCAGATTGGGCAAAATTGATGTTTATGTGGGCCGCCTGCAAGTCATCAGCAATCATGTCCACTCATATCGTGGCCTGTCTCCTCCTGTATCGGCACAGACAGGTAAGCACCGTCTTCGCTTCCAGTGCGGCATGCACAATGGCAACCCTTCCTTCTTTGGCCAGTTTTATTGGTTCATAACTATTGTAACAAACGGGTGCATTTGGCAGGGTGTTCTGCTGTCCAAACTGGTGGAGGATTTCTTCAATATGAAGGAAGAGATCTTGTCACGGGACTTCGACCTGGGTTTTTCTGGGAACTCGGAGGATGTGGTCATGCACGCGCTCAGCCTTCTAGGAAACTGTGTGAATGTCACCAGCACCAACAAAAACACAGAGTTCATCATTGCCCCTAGCAACACTGTGCCCGCACTCTTTGAGCTCAATTTCTACAGCAACGGCCTTTTCCATGTCTTCATTGGAGATGCCATTATAGCTTGCAGCGCACTGGCCCTGCTGAGAGAGCAATCTGCAACTTCAGTGAATGAGCAGAATTCTTCATCCATGCTGCTCAGCCAGGAGAGACTGATCCGCAGAGCTGCAGGCCTCTCCCACTTTTTGTCCAATGAGGTGGCGGTAGCACTGCCTTGTCAGACTTTGTACCAGGTCTTCCATGATGCTATCACCAGATTAATCGAGTATGGTGTACTTACTGTAGCTGAGGAGGACCAGGAGGAGTTGAGCCCGTCCGAGGAGCCTTGGCCCAAGAAGTTTCCAGAGACTCTTTCTTGGCGAAGTGATGAAGAAGATGAAGACAGTGACTTTGGAGATGAACAGAGAGACCGTTACCTAAAGGTGAGCCCATCACCTGAGCACCAGGAATTTTATACTTTTCTGCAGAGGATTCTCACTCCAGTGCTGGAGGCCTACAGTGGTGCTGCTATCTTTATACACAGCCTGAGTTCGCCCATGTCAGAGAGAGAGTACACCCATCAGCTTTTCAAATATCTGCTAACGCGCACAGAGAGAGGAGTGGCTGCATATGGAGAGAGTGCCACACACTACCTCGTAAAGAATACAGTAAAAACATTTAAAGAGCTGGGGGTGCTTAAAGAAAGACGAGAGGGTGGTGTGTGCAGTCTGGAGCTGAGTAGCGCTTTCTTACCTCAGGCCAACAGGAACAAACTCCTGCAGTACATTCTGGGTTTCAGTCTGATGTGACGCACTAGGACCATCAAAGCAGCTGTGCAGCTCTCCACACCACTCAAGGGCTTTTTACTGGCTAATCATGACTGTCAAAGGTGCTACTCTAAGGAAAGCTTTACCTGGAAGTGCCTTCACCAAACGCCTCATACTAGACTTAAGTTAGTCTTCCCTTCACTATAAA

Function

symbol description
gpam Predicted to enable glycerol-3-phosphate O-acyltransferase activity. Predicted to be involved in several processes, including glycerol-3-phosphate metabolic process; phospholipid biosynthetic process; and triglyceride biosynthetic process. Predicted to act upstream of or within cellular lipid metabolic process. Predicted to be located in endoplasmic reticulum; mitochondrial outer membrane; and plasma membrane. Predicted to be active in mitochondrial membrane. Orthologous to human GPAM (glycerol-3-phosphate acyltransferase, mitochondrial).

GO:

id name namespace
GO:0004366 glycerol-3-phosphate O-acyltransferase activity molecular_function

KEGG:

id description
K00629 GPAT1_2; glycerol-3-phosphate O-acyltransferase 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_07619266_07636507.mRNA True 3501 mRNA 0.49 18 7619100 7637052

Neighbor

gene id symbol gene type direction distance location
CI01000063_07605652_07611233 NA coding downstream 7867 7605613 ~ 7611233 (-)
CI01000063_07578043_07590189 CPN1 coding downstream 28409 7577976 ~ 7590691 (-)
CI01000063_07525686_07551770 DNMBP coding downstream 67330 7525686 ~ 7551770 (-)
CI01000063_07516671_07521503 NA coding downstream 97239 7516446 ~ 7521861 (-)
CI01000063_07493274_07509323 RNF157 coding downstream 109777 7493012 ~ 7509323 (-)
CI01000063_07653502_07666823 GUCY2G coding upstream 16450 7653502 ~ 7667711 (-)
CI01000063_07678778_07683475 ZDHHC6 coding upstream 41254 7678306 ~ 7683543 (-)
CI01000063_07790166_07793320 NA coding upstream 152986 7790038 ~ 7795339 (-)
G266670 NA non-coding downstream 26380 7592454 ~ 7592720 (-)
G266833 NA non-coding downstream 96110 7522718 ~ 7522990 (-)
G266647 NA non-coding downstream 103405 7511936 ~ 7515695 (-)
G266827 NA non-coding downstream 138223 7480634 ~ 7480877 (-)
G266685 NA non-coding downstream 151953 7464469 ~ 7467147 (-)
G266846 NA non-coding upstream 51800 7688852 ~ 7689102 (-)
G266660 NA other downstream 177665 7439085 ~ 7441435 (-)
G266797 NA other downstream 328876 7289495 ~ 7290224 (-)
G265976 NA other downstream 1328154 6283058 ~ 6290946 (-)
CI01000063_05616519_05617045 NA other downstream 2001988 5615806 ~ 5617112 (-)
CI01000063_05189361_05189645 CRIPT other downstream 2428483 5188403 ~ 5189645 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004826 gpam coding NC_007123.7 CM002896.2 31494830 ~ 31534090 (+)