G262053


Basic Information

Item Value
gene id G262053
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 655436 ~ 655661 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU297456
TTTCAAGTGGTCTCTTTACTGAAAAACTGTTTACAGCATTGCGTGTGGCTGTCAGACCTGAGGTCATTAAAGAGCAGGTAGAAGCTGTTACATGGTCCAGAAATTGTTGCTAGGTATTCAGGCAATGTGTTAAGTTACAGATCATCTTTTACAAGCATTTTAATAACACTCTGAGAATGAGGACAGATAAAAACACAAGAGGGAAGCTTCACATCACGTATCAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297456 True 226 lncRNA 0.38 1 655436 655661

Neighbor

gene id symbol gene type direction distance location
CI01000063_00562850_00563761 PPP1R3CB coding upstream 91514 562750 ~ 563922 (+)
CI01000063_00533801_00557577 MPP3B coding upstream 97730 533801 ~ 558334 (+)
CI01000063_00478894_00523263 NA coding upstream 132075 478894 ~ 523361 (+)
CI01000063_00473977_00476385 NA coding upstream 178498 473977 ~ 476938 (+)
CI01000063_00452557_00462052 ZNF281B coding upstream 193286 452557 ~ 462150 (+)
CI01000063_00659693_00662317 NA coding downstream 3969 659630 ~ 662425 (+)
CI01000063_00669808_00687564 NA coding downstream 14147 669808 ~ 687816 (+)
CI01000063_00737387_00744421 PANK1, PANK1B coding downstream 81423 737084 ~ 745002 (+)
CI01000063_00768000_00776500 SLC16A12B coding downstream 111222 766883 ~ 777761 (+)
CI01000063_00811088_00811849 CH25H coding downstream 155220 810881 ~ 812197 (+)
G262043 NA non-coding upstream 26326 628910 ~ 629110 (+)
G262042 NA non-coding upstream 26863 628272 ~ 628573 (+)
G262037 NA non-coding upstream 30627 624559 ~ 624809 (+)
G262034 NA non-coding upstream 34004 621117 ~ 621432 (+)
G262026 NA non-coding upstream 41741 613463 ~ 613695 (+)
G262060 NA non-coding downstream 54449 710110 ~ 710554 (+)
G262135 NA non-coding downstream 100726 756387 ~ 764451 (+)
G262080 NA non-coding downstream 133801 789462 ~ 809644 (+)
G262150 NA non-coding downstream 174016 829677 ~ 829953 (+)
G262152 NA non-coding downstream 175799 831460 ~ 831718 (+)
G261700 NA other upstream 380986 252412 ~ 274450 (+)
G261984 NA other downstream 10139 665800 ~ 667382 (+)
G262194 NA other downstream 488210 1139352 ~ 1145007 (+)
G262423 NA other downstream 1585747 2241408 ~ 2242965 (+)
G262436 NA other downstream 2057954 2713615 ~ 2714517 (+)

Expression


Co-expression Network