G263588


Basic Information

Item Value
gene id G263588
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 2867522 ~ 2867784 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU299207
CTGAGCATCGCAACAGTAAGCTTGCTCTGCCCGGTACAGTATTTTCTCTGCTCTTCTCTTTGCATCCGTCTTCAGCATGTCCCATCTCTGGCCTCTGTTAACGTCCACACAAATTACATTTTGGGAAATGATTGCAATGCATTTTGTGTGCAAGTCCGGGACAAAAAATGAAACTGGCCGGTTCTGATTGATGGTCGGTAGACCGGTGCATCTCTACTACTGGCAACCCTTCATCTAAAGCTCTAATGAGGAGAACATGCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299207 True 263 lncRNA 0.47 1 2867522 2867784

Neighbor

gene id symbol gene type direction distance location
CI01000063_02788126_02820510 CASKIN2 coding upstream 46934 2788126 ~ 2820588 (+)
CI01000063_02757057_02761321 NA coding upstream 106008 2756792 ~ 2761514 (+)
CI01000063_02744075_02750377 ST6GALNAC1.1 coding upstream 116936 2744075 ~ 2750586 (+)
CI01000063_02697497_02705829 NA coding upstream 161657 2697376 ~ 2705865 (+)
CI01000063_02691683_02695421 STX4 coding upstream 171994 2691683 ~ 2695528 (+)
CI01000063_03135170_03135337 NA coding downstream 267354 3135138 ~ 3135403 (+)
CI01000063_03213632_03233822 CAR10, CA10 coding downstream 345848 3213632 ~ 3234293 (+)
CI01000063_03307922_03312636 NA coding downstream 440138 3307922 ~ 3312807 (+)
CI01000063_03315604_03323945 NA coding downstream 447820 3315604 ~ 3323945 (+)
CI01000063_03333320_03353312 NA coding downstream 465536 3333320 ~ 3353585 (+)
G263552 NA non-coding upstream 40491 2826810 ~ 2827031 (+)
G262413 NA non-coding upstream 148205 2718858 ~ 2719317 (+)
G262434 NA non-coding upstream 160323 2667066 ~ 2707199 (+)
G262728 NA non-coding upstream 233811 2633171 ~ 2633711 (+)
G263611 NA non-coding downstream 20151 2887935 ~ 2888140 (+)
G263629 NA non-coding downstream 38082 2905866 ~ 2906180 (+)
G263673 NA non-coding downstream 76545 2944329 ~ 2958272 (+)
G263684 NA non-coding downstream 95903 2963687 ~ 2963902 (+)
G263717 NA non-coding downstream 134298 3002082 ~ 3005307 (+)
G262436 NA other upstream 153005 2713615 ~ 2714517 (+)
G262423 NA other upstream 624557 2241408 ~ 2242965 (+)
G262194 NA other upstream 1722515 1139352 ~ 1145007 (+)
G262060 NA other upstream 2156968 710110 ~ 710554 (+)
G261984 NA other upstream 2200140 665800 ~ 667382 (+)
G265391 NA other downstream 3045999 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 3467494 6335618 ~ 6338283 (+)

Expression


Co-expression Network