G263629


Basic Information

Item Value
gene id G263629
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 2905866 ~ 2906180 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU299248
TTACACAGGTCTTGACTGCATTGCAGTTCCATATCACTTCGCCAAATGTTTTCATTTATCTCAATAGGTTCTTACAGCCTACAACCGCAAAAGAAACAAAACCCACAACGACACTGACCAAGCAAATAAATATAGTAAACAATAGGATGAAAACGACAAATTATTGTCATGGTTTTTGCCACAAAATACGTTTGTCCTGAAAGCGCATACTCTCTCGCGCTCACTCTCTCTTTCAAATGTACACACGTACTGTATAGTATGGACACACACTTGCACAGAAACGTTTTGTCAGCTCTGCTCTGATGAATTAATCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299248 True 315 lncRNA 0.39 1 2905866 2906180

Neighbor

gene id symbol gene type direction distance location
CI01000063_02788126_02820510 CASKIN2 coding upstream 85278 2788126 ~ 2820588 (+)
CI01000063_02757057_02761321 NA coding upstream 144352 2756792 ~ 2761514 (+)
CI01000063_02744075_02750377 ST6GALNAC1.1 coding upstream 155280 2744075 ~ 2750586 (+)
CI01000063_02697497_02705829 NA coding upstream 200001 2697376 ~ 2705865 (+)
CI01000063_02691683_02695421 STX4 coding upstream 210338 2691683 ~ 2695528 (+)
CI01000063_03135170_03135337 NA coding downstream 228958 3135138 ~ 3135403 (+)
CI01000063_03213632_03233822 CAR10, CA10 coding downstream 307452 3213632 ~ 3234293 (+)
CI01000063_03307922_03312636 NA coding downstream 401742 3307922 ~ 3312807 (+)
CI01000063_03315604_03323945 NA coding downstream 409424 3315604 ~ 3323945 (+)
CI01000063_03333320_03353312 NA coding downstream 427140 3333320 ~ 3353585 (+)
G263611 NA non-coding upstream 17726 2887935 ~ 2888140 (+)
G263588 NA non-coding upstream 38082 2867522 ~ 2867784 (+)
G263552 NA non-coding upstream 78835 2826810 ~ 2827031 (+)
G262413 NA non-coding upstream 186549 2718858 ~ 2719317 (+)
G263673 NA non-coding downstream 38149 2944329 ~ 2958272 (+)
G263684 NA non-coding downstream 57507 2963687 ~ 2963902 (+)
G263717 NA non-coding downstream 95902 3002082 ~ 3005307 (+)
G263727 NA non-coding downstream 109217 3015397 ~ 3015708 (+)
G263730 NA non-coding downstream 114926 3021106 ~ 3021468 (+)
G262436 NA other upstream 191349 2713615 ~ 2714517 (+)
G262423 NA other upstream 662901 2241408 ~ 2242965 (+)
G262194 NA other upstream 1760859 1139352 ~ 1145007 (+)
G262060 NA other upstream 2195312 710110 ~ 710554 (+)
G261984 NA other upstream 2238484 665800 ~ 667382 (+)
G265391 NA other downstream 3007603 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 3429098 6335618 ~ 6338283 (+)

Expression


Co-expression Network