Gene
RNA
| Item | Value |
|---|---|
| gene id | G263684 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000063 |
| NCBI id | null |
| chromosome length | 7808773 |
| location | 2963687 ~ 2963902 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU299303 | True | 216 | lncRNA | 0.30 | 1 | 2963687 | 2963902 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000063_02788126_02820510 | CASKIN2 | coding | upstream | 143099 | 2788126 ~ 2820588 (+) |
| CI01000063_02757057_02761321 | NA | coding | upstream | 202173 | 2756792 ~ 2761514 (+) |
| CI01000063_02744075_02750377 | ST6GALNAC1.1 | coding | upstream | 213101 | 2744075 ~ 2750586 (+) |
| CI01000063_02697497_02705829 | NA | coding | upstream | 257822 | 2697376 ~ 2705865 (+) |
| CI01000063_02691683_02695421 | STX4 | coding | upstream | 268159 | 2691683 ~ 2695528 (+) |
| CI01000063_03135170_03135337 | NA | coding | downstream | 171236 | 3135138 ~ 3135403 (+) |
| CI01000063_03213632_03233822 | CAR10, CA10 | coding | downstream | 249730 | 3213632 ~ 3234293 (+) |
| CI01000063_03307922_03312636 | NA | coding | downstream | 344020 | 3307922 ~ 3312807 (+) |
| CI01000063_03315604_03323945 | NA | coding | downstream | 351702 | 3315604 ~ 3323945 (+) |
| CI01000063_03333320_03353312 | NA | coding | downstream | 369418 | 3333320 ~ 3353585 (+) |
| G263673 | NA | non-coding | upstream | 5415 | 2944329 ~ 2958272 (+) |
| G263629 | NA | non-coding | upstream | 57507 | 2905866 ~ 2906180 (+) |
| G263611 | NA | non-coding | upstream | 75547 | 2887935 ~ 2888140 (+) |
| G263588 | NA | non-coding | upstream | 95903 | 2867522 ~ 2867784 (+) |
| G263552 | NA | non-coding | upstream | 136656 | 2826810 ~ 2827031 (+) |
| G263717 | NA | non-coding | downstream | 38180 | 3002082 ~ 3005307 (+) |
| G263727 | NA | non-coding | downstream | 51495 | 3015397 ~ 3015708 (+) |
| G263730 | NA | non-coding | downstream | 57204 | 3021106 ~ 3021468 (+) |
| G263731 | NA | non-coding | downstream | 57782 | 3021684 ~ 3021886 (+) |
| G263671 | NA | non-coding | downstream | 98439 | 3062341 ~ 3144176 (+) |
| G262436 | NA | other | upstream | 249170 | 2713615 ~ 2714517 (+) |
| G262423 | NA | other | upstream | 720722 | 2241408 ~ 2242965 (+) |
| G262194 | NA | other | upstream | 1818680 | 1139352 ~ 1145007 (+) |
| G262060 | NA | other | upstream | 2253133 | 710110 ~ 710554 (+) |
| G261984 | NA | other | upstream | 2296305 | 665800 ~ 667382 (+) |
| G265391 | NA | other | downstream | 2949881 | 5913783 ~ 5919029 (+) |
| CI01000063_06335618_06338138 | HOXB8B | other | downstream | 3371376 | 6335618 ~ 6338283 (+) |
