G263730


Basic Information

Item Value
gene id G263730
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 3021106 ~ 3021468 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU299350
CAATAAGCAGACCTGCCAACCTATACGCAATTTGCGTAGCGGATACGCATTTTGACTTCAAAGTACGCTGGTACGATTTGTCACTCTAAACTACGCAAAAACCTGGTGACGCCTCTGTGCACGCGCAGTCCTCAAATCAAGCAACAGCAAAAGAAGAAGAGTTCGACCAATCATAGCGCTAGGTCCTTCCCCCAAATAGCAAGTGGGGATGATTGACAGATGCGTAAAGCCTATCATTAAAAAGAGACTGAAAATCGACACCAATAAAGATTCCCGCTCGATCCCCCTTCATAATACTTAGTAAGGAGGCCATAATAATTTTTGACTCATGGCTGAAGTTAAGTTTCTCCAGCTCTCCCCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299350 True 363 lncRNA 0.45 1 3021106 3021468

Neighbor

gene id symbol gene type direction distance location
CI01000063_02788126_02820510 CASKIN2 coding upstream 200518 2788126 ~ 2820588 (+)
CI01000063_02757057_02761321 NA coding upstream 259592 2756792 ~ 2761514 (+)
CI01000063_02744075_02750377 ST6GALNAC1.1 coding upstream 270520 2744075 ~ 2750586 (+)
CI01000063_02697497_02705829 NA coding upstream 315241 2697376 ~ 2705865 (+)
CI01000063_02691683_02695421 STX4 coding upstream 325578 2691683 ~ 2695528 (+)
CI01000063_03135170_03135337 NA coding downstream 113670 3135138 ~ 3135403 (+)
CI01000063_03213632_03233822 CAR10, CA10 coding downstream 192164 3213632 ~ 3234293 (+)
CI01000063_03307922_03312636 NA coding downstream 286454 3307922 ~ 3312807 (+)
CI01000063_03315604_03323945 NA coding downstream 294136 3315604 ~ 3323945 (+)
CI01000063_03333320_03353312 NA coding downstream 311852 3333320 ~ 3353585 (+)
G263727 NA non-coding upstream 5398 3015397 ~ 3015708 (+)
G263717 NA non-coding upstream 15799 3002082 ~ 3005307 (+)
G263684 NA non-coding upstream 57204 2963687 ~ 2963902 (+)
G263673 NA non-coding upstream 62834 2944329 ~ 2958272 (+)
G263629 NA non-coding upstream 114926 2905866 ~ 2906180 (+)
G263731 NA non-coding downstream 216 3021684 ~ 3021886 (+)
G263671 NA non-coding downstream 40873 3062341 ~ 3144176 (+)
G263771 NA non-coding downstream 163668 3185136 ~ 3187703 (+)
G263800 NA non-coding downstream 250722 3272190 ~ 3272612 (+)
G263805 NA non-coding downstream 267436 3288904 ~ 3289363 (+)
G262436 NA other upstream 306589 2713615 ~ 2714517 (+)
G262423 NA other upstream 778141 2241408 ~ 2242965 (+)
G262194 NA other upstream 1876099 1139352 ~ 1145007 (+)
G262060 NA other upstream 2310552 710110 ~ 710554 (+)
G261984 NA other upstream 2353724 665800 ~ 667382 (+)
G265391 NA other downstream 2892315 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 3313810 6335618 ~ 6338283 (+)

Expression


Co-expression Network