G263800


Basic Information

Item Value
gene id G263800
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 3272190 ~ 3272612 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU299422
CAGATATAAAAAGCTAACAGTAGGCTATATTCAGACTACAGCACACCATGGTCGCGGATCAAGGTCACCACCACCAAGCTTCCTCAAACTTTATTTAAAAAACAACTTTATTTAAAAACATGCTCGCTGATTATGATCTGCGCTGTGTATGAATACTTATCCACTTTTTCATGAGAAATGCTGTCCAAATGTCCTGTTTGTCATGATGACGTCTAAAGTCCCCGCCAAAGGAAGTAGTCCCTTTTAGCAATTTGTTAGCAACCGCCGTTTTTAAGACACAATAAAAATCACAAGGGGGTTATAACTGGTGTGTTTTATGTCATAGATCAAAACGTGAAAATATTTAGAGGCTTTGTTAACCACAAACCTTATTTCAGGCGATTTAGCAAAAACCCATAGACTTCGGGGCGATGGAACCGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299422 True 423 lncRNA 0.39 1 3272190 3272612

Neighbor

gene id symbol gene type direction distance location
CI01000063_03213632_03233822 CAR10, CA10 coding upstream 37897 3213632 ~ 3234293 (+)
CI01000063_03135170_03135337 NA coding upstream 136787 3135138 ~ 3135403 (+)
CI01000063_02788126_02820510 CASKIN2 coding upstream 451602 2788126 ~ 2820588 (+)
CI01000063_02757057_02761321 NA coding upstream 510676 2756792 ~ 2761514 (+)
CI01000063_02744075_02750377 ST6GALNAC1.1 coding upstream 521604 2744075 ~ 2750586 (+)
CI01000063_03307922_03312636 NA coding downstream 35310 3307922 ~ 3312807 (+)
CI01000063_03315604_03323945 NA coding downstream 42992 3315604 ~ 3323945 (+)
CI01000063_03333320_03353312 NA coding downstream 60708 3333320 ~ 3353585 (+)
CI01000063_03369570_03370696 NA coding downstream 96596 3369026 ~ 3372142 (+)
CI01000063_03649864_03661903 WNT3 coding downstream 377252 3649864 ~ 3661939 (+)
G263771 NA non-coding upstream 84487 3185136 ~ 3187703 (+)
G263671 NA non-coding upstream 128014 3062341 ~ 3144176 (+)
G263731 NA non-coding upstream 250304 3021684 ~ 3021886 (+)
G263730 NA non-coding upstream 250722 3021106 ~ 3021468 (+)
G263727 NA non-coding upstream 256482 3015397 ~ 3015708 (+)
G263805 NA non-coding downstream 16292 3288904 ~ 3289363 (+)
G263806 NA non-coding downstream 16896 3289508 ~ 3289845 (+)
G263819 NA non-coding downstream 83633 3356245 ~ 3356507 (+)
G263825 NA non-coding downstream 88579 3361191 ~ 3361417 (+)
G263827 NA non-coding downstream 89828 3362440 ~ 3368504 (+)
G262436 NA other upstream 557673 2713615 ~ 2714517 (+)
G262423 NA other upstream 1029225 2241408 ~ 2242965 (+)
G262194 NA other upstream 2127183 1139352 ~ 1145007 (+)
G262060 NA other upstream 2561636 710110 ~ 710554 (+)
G261984 NA other upstream 2604808 665800 ~ 667382 (+)
G265391 NA other downstream 2641171 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 3062666 6335618 ~ 6338283 (+)

Expression


Co-expression Network