XLOC_010358



Basic Information


Item Value
gene id XLOC_010358
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 204125 ~ 206259 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021773
CTCGAACCTGATGTTGTACGAGGTGAGCTGCTGAGCAAGCTGACCTCTCCAGAAAGCCATTCATATGTCATCAATAAGTAATCAGCAGAATCAAACCACCTGATAATGTTCATTTCACAAAGTACAGCCAGGATACATAAACGCCTTTCCCAAAACTACAGCCCTGGGCTCATGTTCCTGCGAGCCTGTGTTGTTGATGGAGCGGTGTCTgatacacacactcgcacacactgcTGATGTTCTGCAGGACAGATGAAGGAACGCTCAGACCGTCCTGATGCAGCAGGCTGAGAGATGGGCTGATTTTCAGGACCAATGGCCATCAGAGCGTCCAGCTACACAACAGCAATCCAATGAGAGGAACATGGTTTTCAAGCGTTTTCCAGACTCTGACAGCACATCCATTTCAGCTGACAGCCCGCAAATACTGCTCCGGTCCGCATTTACTGAAAACAGCAGCGCAGGACTTTCTCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021773 True 474 lncRNA 0.49 2 204125 206259

Neighbor


gene id symbol gene type direction distance location
XLOC_010357 NA coding downstream 26262 173564 ~ 177863 (-)
XLOC_010356 NA coding downstream 136418 66537 ~ 67707 (-)
XLOC_010359 NA coding upstream 21561 227820 ~ 239273 (-)
XLOC_010360 slc6a3 coding upstream 41980 248239 ~ 263658 (-)
XLOC_010361 LO017917.1 coding upstream 71530 277789 ~ 280835 (-)
XLOC_010362 NA coding upstream 96496 302755 ~ 313553 (-)
XLOC_010363 NA coding upstream 140004 346263 ~ 353780 (-)
XLOC_010626 CR392024.2 misc upstream 20688853 20895112 ~ 20895175 (-)
XLOC_010364 NA non-coding upstream 148587 354846 ~ 367144 (-)
XLOC_010366 NA non-coding upstream 345423 551682 ~ 552627 (-)

Expression



Co-expression Network