G264388


Basic Information

Item Value
gene id G264388
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 3427432 ~ 3521389 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU300066
GGGAGGGAGGAGCGATCGTAGTATTTCTCTTCATTTCAAATCCCTGTCGTGGCAGCACGGGCAAGGCAGAGGACTTTTCTCCCCTTCAAACTAAGGGGAAAACCCACCACCAATTGCCTACTGCACGTCCGAGAGAGCAAACGGAGGACTTTGGGAGGAGGAAACTAGTTTGAAGGCACGCTGCGGTGGAATCGGCTCACTGTGTGCACTAGTGTCTCCTCACTTGCACTGGATACACGAAGCAGGACGTTTTCACTTATCTGCGACTCGCAGGAACCCCGCAATCTCCTTGAAACCCGCCAAACATTCATACGGACGACGGCCTACAGTTCCAGCGAACCCAGGCCTGGGGAAATCATTAACCAGAAACAAAGCACAACAGGACACAGATTGTAATCCAGAAAGATCCAAATGACAATCATCAGTGATAACTGGAGATTCAGCCGTGGTCAAAAAGCAAAAGACTTCGGACTGCGGAGTGGCTACAGAAATTGAAATCTACAGGTAACACTAATACACACTAAATACACAGTCACGCAATGCTTAAGTTGTTAACATTAACAATTTGAGAACAAAGTATAACAACAATAATAATTTGCATGGTTTCATGTGATATGAGCTAAGCGATCGTTAGATTTAATCACCATTATTGTAGGCTAATGCTTTTTCCCTCAGTTGGTCAGAACAAAAGTGGCAGACATGTTACTTACCTGTTCAGATGACATTTTCCGGTGAAAATTCCTATTTTGGTCATACCTCAAGACTACAATCTGTGATTCCGAAGTATCACTAAGAGGCAAATCTTACAGACAGCAGCTTTAAACAATTGCTGAAAAAAAAATATTTTTGCTGCTTGTTCAAATTACTTAATTAAAATAAGCTAAAGCAACAATTCCTACACATTTTGTCCTAACTTAATTTCATTGTGTTCAATCCATTTAAATATATCTAATACTGAAGTTTACTTAATCTGTTTGTGTTGAGATTACATGAATGAATTTTGTTCCATTAACTGAAAATGGACAGTGCTTGTTAGTTCCCAGCATGCATTGCATATGGGTGGATCAAGAGAGAAAATGTTTAAAAATTAGATGTTATATATATTTTATGTGTTTTGCAGTAAGATGAAAATGGGGGATGCTTGATAGTGTTTAATAGTGTTCAGTGTTCACTTATATTGGAATTATTAGAATGTTTTAAATTTCACTGGGTTACCATTATAGAGAAGAGTGGGGCATTTGCATAGGCTGTGGACTGGTGCTTCACATTAAATTTCTGCTTTGTGCTGAAAGCTAACATTTAACGTGTTAGTGTGTGCACTATTGTTAGCCAATAGGCTGTTGACGATCTAGTACAGTCTAATGATTCAATCACATAACACATATATGAAGTTGAATTGAATTTAAGAACATATTGGGTGAATGGATGTTTTGGATGAATAAATCATGAATCAATGAACCTCACAAAATGTACACTATTAAATCATGTAAATTATTTTTTTTCAGTGATAACTGTGACTATATCAACATGAAATATTGTTTACGAAAAAAGACGAGACTAAAATATATAGTTAAAAAAAAAAAAAAATTCTAAAATCTCTTTATTTTTATCGTAATAAAAGAGGAGACAAAATATTACAGACTGCTGTACAAGCCTTTAATACGATATTTCATGCTTACGGTAGATGTAAAGAGTTTAAATCTCACAATCAGAGCTTTTCCGTTAAAAGATACATTTTCTGTCCGGTGTTTTACTTAATCTTTGCAATCTGGCAATCGTGTGCACATGCTTTCTCTACACTGCAGAAGAAGCGCAAATGATCTGAAAACACCAACAAACAAGTAAGCTGTAGTGTAGCGATCTCTATTTGAGATAATGTGCTATAATAAAAGTGTCATTCAGTCAGTCTCTGTTATGTCACTCACGAGCCACTTGCGCCATTTGCAATCTGCGATCAAACCTTCTCAGTGATAAACTGTAATAAATCCAAACATGGATCTTGGCTATTGTTTGCGATTGTGGCTGCTGAATAAATGCACTTGTGCAACCTCTGTGTGACAATACAAAGTCTTTTTTGCTGTGTAAATGGAAAAACATTTTCATAATGTCGAGAGTGTTAATTTATATGATAAATAGCCTATAGTACACTAAATGAGGTAAAATAAACCATGCATATGAATTGACATTCTACTGATTTGTGCTTACAGGTGAAAGTGCAATAATTCTAATGAAATGTAAAAAAAAAATTCTCAAATGACAATTGTTGCGATTATGATTTTGAGCAAAATAACCATTGTTATCAGTCTAACCATTATGCAGCATGACAAATGTGATTGACTAAAACTAGACTAAAATGCCCAGACATTCCGACATTTTGACTGAAACTTGACTAAACAAAAACAGGACAAGGTTGACTTGACTATATATGATAAAAAATAAAAAGTACTTTTGACACAGGACTAAGACTAAGTTAAAAATAGCTGACTAAATTAACACTAGTTTTAGGGAGTTCAAAAACAGTGCTTACTGATATCAAGAATAACTCATTAAAGAAAGTTGAAAATGTAAAAAAGCATAAAAGGACCCCTTTAAGCTGAAAGTATACTGTCCACACGGACAACAGCACATGTGCGAGTAATTTGAGTGCTTGAAAAGGAAGGTCCACTGGTTTGCGCGCTCAACTTTGCACGAGACAGAGCAGAATGTGGATACCTGGGCCTATAATCTGATTCCTACTGTACTGTAAATCCAATCATATCTGTTCCACAGGGAAGAAAGAGTTGAGAAATTGAACTCTGTCTGCATTAGTTATCATCACCTTCTGCGTCATTATCTGCCAGACTCATACAGCACCTAACTTTAGTCGTTTCTCTTCTACCTGCGTTCGGCCTGGATACCTGAGTGCAAAGATTATGTCTAATGTGTGCTTATAGCAGCCAACAACTGCCAGCCATGTGCGTTTGTGTGGGTGGGTGTGTGTGTACTCTGCCTCTGCTGTTAGTGTTGTAGTTTTTTTTTTTTTTTTTTTTCTAGAGGGCCATCTGTTCTCTCAAAGACTCTCTCAGATTCCATATGGCCTTGATGGAGTGGATACATTCTGATGAAGAACCACTAGTGAGACCAAGGGCCACTTGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300066 True 3137 lncRNA 0.37 3 3427432 3521389

Neighbor

gene id symbol gene type direction distance location
CI01000063_03373714_03386774 TR-ALPHA, THRAA, THRAB, THRA coding downstream 40658 3373043 ~ 3386774 (-)
CI01000063_03296061_03306819 EME1 coding downstream 120613 3295934 ~ 3306819 (-)
CI01000063_02990060_02990880 NA coding downstream 435965 2988694 ~ 2991467 (-)
CI01000063_02725759_02726399 NA coding downstream 700898 2725759 ~ 2726535 (-)
CI01000063_02707551_02721566 SNF8 coding downstream 705866 2706964 ~ 2721582 (-)
CI01000063_03615200_03619061 ORMDL2, ORMDL3 coding upstream 93747 3615136 ~ 3620436 (-)
CI01000063_03628232_03633396 NA coding upstream 106688 3628077 ~ 3633446 (-)
CI01000063_03667811_03688065 NSFB, NSF.L, NSFA, NSF coding upstream 146152 3667541 ~ 3688065 (-)
CI01000063_03695944_03716188 NA coding upstream 174555 3695944 ~ 3716188 (-)
CI01000063_03742908_03771506 NEURL4 coding upstream 221227 3742616 ~ 3771506 (-)
G264382 NA non-coding downstream 58906 3367261 ~ 3368526 (-)
G264508 NA non-coding downstream 72676 3354293 ~ 3354756 (-)
G264495 NA non-coding downstream 88911 3338226 ~ 3338521 (-)
G264482 NA non-coding downstream 114664 3312552 ~ 3312768 (-)
G264481 NA non-coding downstream 114963 3312245 ~ 3312469 (-)
G264522 NA non-coding upstream 12651 3534040 ~ 3534243 (-)
G264532 NA non-coding upstream 22066 3543455 ~ 3543676 (-)
G264545 NA non-coding upstream 38154 3559543 ~ 3559788 (-)
G264564 NA non-coding upstream 109770 3631159 ~ 3631379 (-)
G264565 NA non-coding upstream 110904 3632293 ~ 3632514 (-)
CI01000063_02326799_02327290 CBY1 other downstream 1099713 2326741 ~ 2327309 (-)
CI01000063_02177769_02178239 NA other downstream 1249096 2177747 ~ 2178395 (-)
CI01000063_01669384_01670016 HBAE1 other downstream 1757356 1669317 ~ 1672019 (-)
G265567 NA other upstream 1641105 5183279 ~ 5183287 (-)
CI01000063_05189361_05189645 CRIPT other upstream 1667014 5188403 ~ 5189645 (-)
CI01000063_05616519_05617045 NA other upstream 2025312 5615806 ~ 5617112 (-)
G265976 NA other upstream 2766769 6283058 ~ 6290946 (-)
G266797 NA other upstream 3768106 7289495 ~ 7290224 (-)

Expression


Co-expression Network