G264575


Basic Information

Item Value
gene id G264575
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 3641530 ~ 3641781 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU300257
TGGGAACGAATTTTTAATTTGTGAACACGATATACATAATTTTTTCCCCACGTCATGTGCGGGACTCAGTACTAGACAAAGCATATTTTATTGTCATTCTCCAAATGTTTTTCAGCTCTCATGCATTCACCAGCTTCTCCAAAAAAGTGGGAGATGAGGCACCTGTCTATGGCCACACTGCTGAGTGTTCTGTTTTTGTCCAGAGGCAGAAGAAATAAGAAACTCTTTGAACTTGTGAGTTTGTGACATCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300257 True 252 lncRNA 0.40 1 3641530 3641781

Neighbor

gene id symbol gene type direction distance location
CI01000063_03628232_03633396 NA coding downstream 8084 3628077 ~ 3633446 (-)
CI01000063_03615200_03619061 ORMDL2, ORMDL3 coding downstream 21094 3615136 ~ 3620436 (-)
CI01000063_03426029_03462400 NA coding downstream 177632 3425606 ~ 3463898 (-)
CI01000063_03373714_03386774 TR-ALPHA, THRAA, THRAB, THRA coding downstream 254756 3373043 ~ 3386774 (-)
CI01000063_03296061_03306819 EME1 coding downstream 334711 3295934 ~ 3306819 (-)
CI01000063_03667811_03688065 NSFB, NSF.L, NSFA, NSF coding upstream 25760 3667541 ~ 3688065 (-)
CI01000063_03695944_03716188 NA coding upstream 54163 3695944 ~ 3716188 (-)
CI01000063_03742908_03771506 NEURL4 coding upstream 100835 3742616 ~ 3771506 (-)
CI01000063_03772788_03776821 SHBG coding upstream 130835 3772616 ~ 3776821 (-)
CI01000063_03784602_03791834 ZBTB4 coding upstream 141813 3783594 ~ 3791834 (-)
G264574 NA non-coding downstream 1027 3640216 ~ 3640503 (-)
G264573 NA non-coding downstream 1639 3639686 ~ 3639891 (-)
G264572 NA non-coding downstream 2595 3638698 ~ 3638935 (-)
G264571 NA non-coding downstream 2925 3638332 ~ 3638605 (-)
G264570 NA non-coding downstream 3306 3637996 ~ 3638224 (-)
G264576 NA non-coding upstream 565 3642346 ~ 3642595 (-)
G264577 NA non-coding upstream 1512 3643293 ~ 3643641 (-)
G264579 NA non-coding upstream 2359 3644140 ~ 3644437 (-)
G264580 NA non-coding upstream 3384 3645165 ~ 3645400 (-)
G264581 NA non-coding upstream 4584 3646365 ~ 3646576 (-)
CI01000063_02725759_02726399 NA other downstream 914995 2725759 ~ 2726535 (-)
CI01000063_02326799_02327290 CBY1 other downstream 1313811 2326741 ~ 2327309 (-)
CI01000063_02177769_02178239 NA other downstream 1463194 2177747 ~ 2178395 (-)
CI01000063_01669384_01670016 HBAE1 other downstream 1971454 1669317 ~ 1672019 (-)
G265567 NA other upstream 1520713 5183279 ~ 5183287 (-)
CI01000063_05189361_05189645 CRIPT other upstream 1546622 5188403 ~ 5189645 (-)
CI01000063_05616519_05617045 NA other upstream 1904920 5615806 ~ 5617112 (-)
G265976 NA other upstream 2646377 6283058 ~ 6290946 (-)
G266797 NA other upstream 3647714 7289495 ~ 7290224 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_005337 NA non-coding NC_007123.7 CM002896.2 22270500 ~ 22280703 (-)