XLOC_010362


Basic Information

Item Value
gene id XLOC_010362
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 302755 ~ 313553 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022068
GGAACTGCGTCTGGCTTCAGCACTGTGTAAGGTTCGGCTCAGTTGAATGATCTGCTAATACTGCCCTCTCCTGGTCAGATCAGGAACACTTCACGTTCCAGAGTCTCTATCCCCTACTTGCACATCCAGCATCATGGAAAAGCCAACTATTGACTCAAGTGTTTGTGGCCTGAACACTCGTCCTCTGACAGACTAAAGGTCAGAGAGCCGCTGTACACACCGCTTCTCCTTTATCAGCGTCTGTCAGGCTTCAGTTTGCTGATCTGAGAACAGATGCCGCAGCGGGACCCCAGGGCTCAACAGGTGCACGGGTACACCACAGAACTCCTGCTCTTATCACCGCACATGACGACACGTTCGCACAGACTCCAGCGACTGTGGCTGGAGAAACACACCGAACAGAGGAACAACATCCGTCTGTCTGGCAGTGGAGTTTCACTGCGGCCTGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022068 True 449 lncRNA 0.53 3 302755 313553

Neighbor

gene id symbol gene type direction distance location
XLOC_010361 LO017917.1 coding downstream 21920 277789 ~ 280835 (-)
XLOC_010360 slc6a3 coding downstream 39097 248239 ~ 263658 (-)
XLOC_010359 NA coding downstream 63482 227820 ~ 239273 (-)
XLOC_010358 NA coding downstream 96496 204125 ~ 206259 (-)
XLOC_010357 NA coding downstream 124892 173564 ~ 177863 (-)
XLOC_010363 NA coding upstream 32710 346263 ~ 353780 (-)
XLOC_010364 NA coding upstream 41293 354846 ~ 367144 (-)
XLOC_010365 irx4a coding upstream 65213 378766 ~ 383664 (-)
XLOC_010366 NA coding upstream 238129 551682 ~ 552627 (-)
XLOC_010367 irx2a coding upstream 242193 555746 ~ 563732 (-)
XLOC_010626 CR392024.2 misc upstream 20581559 20895112 ~ 20895175 (-)
XLOC_010356 NA non-coding downstream 235048 66537 ~ 67707 (-)
XLOC_010368 NA non-coding upstream 890589 1204142 ~ 1218570 (-)
XLOC_010369 NA non-coding upstream 1037418 1350971 ~ 1353006 (-)

Expression


Co-expression Network